RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 TREM2Q9NZC2 230 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 CD274Q9NZQ7 290 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 SEC14L3Q9UDX4 400 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 COPS3Q9UNS2 423 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 TET3O43151 1660 aa4.44□□□□□ -1.7
SMG1-204ENST00000561940 CAMSAP2Q08AD1 1489 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 CTTNBP2Q8WZ74 1663 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 HELTA6NFD8 242 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 PCP4L1A6NKN8 68 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 HDAC3O15379 428 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 LY6G6DO95868 133 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 GAPDHP04406 335 aaKnown RBP4.43□□□□□ -1.7
SMG1-204ENST00000561940 BTDP43251 543 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 GSSP48637 474 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 BST1Q10588 318 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 IDI1Q13907 227 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 KLHL38Q2WGJ6 581 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 KCTD21Q4G0X4 260 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 SCARA5Q6ZMJ2 495 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 FTMTQ8N4E7 242 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 DNAJA4Q8WW22 397 aaPredicted RBP4.43□□□□□ -1.7
SMG1-204ENST00000561940 UFD1Q92890 307 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 C12orf42Q96LP6 360 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 FMO2Q99518 471 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 MRPL45Q9BRJ2 306 aaKnown RBP4.43□□□□□ -1.7
SMG1-204ENST00000561940 NICN1Q9BSH3 213 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 RNF167Q9H6Y7 350 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 ZNF639Q9UID6 485 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 KIF25Q9UIL4 384 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 IFT52Q9Y366 437 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 IKBKGQ9Y6K9 419 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 MYO5CQ9NQX4 1742 aa4.43□□□□□ -1.7
SMG1-204ENST00000561940 IQANK1A0A1B0GTG1 560 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 A8MU10 97 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 A8MXQ7 604 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 UBXN8O00124 270 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 HIP1O00291 1037 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 HAT1O14929 419 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 CLDN9O95484 217 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 ETS2P15036 469 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 DDOSTP39656 456 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 CRYBB1P53674 252 aaPredicted RBP4.42□□□□□ -1.7
SMG1-204ENST00000561940 HERPUD1Q15011 391 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 OXA1LQ15070 435 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 NBPF5PQ86XG9 351 aaPredicted RBP4.42□□□□□ -1.7
SMG1-204ENST00000561940 ZNF100Q8IYN0 542 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 RDH10Q8IZV5 341 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 SDR9C7Q8NEX9 313 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 OR9A1PQ8NGU1 263 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 OR1E3Q8WZA6 343 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 RPUSD4Q96CM3 377 aaKnown RBP4.42□□□□□ -1.7
SMG1-204ENST00000561940 CMTM7Q96FZ5 175 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 AZI2Q9H6S1 392 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 SUDS3Q9H7L9 328 aaPredicted RBP4.42□□□□□ -1.7
SMG1-204ENST00000561940 BFARQ9NZS9 450 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 DCDC2Q9UHG0 476 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 RPL36Q9Y3U8 105 aaKnown RBP4.42□□□□□ -1.7
SMG1-204ENST00000561940 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 ERVK-7P63135 1459 aa4.42□□□□□ -1.7
SMG1-204ENST00000561940 PLEKHH1Q9ULM0 1364 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 FMN1Q68DA7 1419 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 IGHV1OR21-1A0A087WYE8 117 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 A0A0J9YXY3 114 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 FAM231BA6NCW3 169 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 A6NIZ1 184 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 OR52A4PA6NMU1 304 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 HSD17B6O14756 317 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 UGT1A9O60656 530 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 KRTAP1-4P0C5Y4 121 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 ZNF19P17023 458 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 NCF2P19878 526 aaPredicted RBP4.41□□□□□ -1.7
SMG1-204ENST00000561940 RAP1BP61224 184 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 CSNK1G2P78368 415 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 GTF3C1Q12789 2109 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 FILIP1LQ4L180 1135 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 FHL5Q5TD97 284 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 ECHDC2Q86YB7 292 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 CDH26Q8IXH8 852 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 C7orf33Q8WU49 177 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMG1-204ENST00000561940 CXorf40BQ96DE9 158 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 PAGE5Q96GU1 130 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 SEC22AQ96IW7 307 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 CNDP1Q96KN2 507 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 MAGEB18Q96M61 343 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 ARHGDIGQ99819 225 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 EBF4Q9BQW3 602 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 NAT9Q9BTE0 207 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 FOLH1BQ9HBA9 442 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 SUN2Q9UH99 717 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 V9GY05 133 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 KDM5AP29375 1690 aaKnown RBP4.41□□□□□ -1.7
SMG1-204ENST00000561940 ASXL1Q8IXJ9 1541 aa4.41□□□□□ -1.7
SMG1-204ENST00000561940 MTUS2Q5JR59 1369 aa4.4□□□□□ -1.7
SMG1-204ENST00000561940 PLEKHG1Q9ULL1 1385 aa4.4□□□□□ -1.7
SMG1-204ENST00000561940 ARHGAP31Q2M1Z3 1444 aa4.4□□□□□ -1.7
SMG1-204ENST00000561940 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 NSG1A0A0A6YYJ2 146 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms