RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RPS6KB2Q9UBS0 482 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 PISDQ9UG56 409 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 CLEC2DQ9UHP7 191 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 GPN3Q9UHW5 284 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-210ENST00000561817 PADI1Q9ULC6 663 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 DIMT1Q9UNQ2 313 aaKnown RBP5.92□□□□□ -1.46
CAPN3-210ENST00000561817 BAIAP2Q9UQB8 552 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 HIF3AQ9Y2N7 669 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 PCDHGA9Q9Y5G4 932 aaKnown RBP5.92□□□□□ -1.46
CAPN3-210ENST00000561817 KNTC1P50748 2209 aa5.92□□□□□ -1.46
CAPN3-210ENST00000561817 AHCTF1Q8WYP5 2266 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SPTBN4Q9H254 2564 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 A0A087X0M5 115 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 A0A1B0GX30 115 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 A0A1W2PPW3 197 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 MED19A0JLT2 244 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TMEM72A0PK05 275 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ZC3H12DA2A288 527 aaKnown RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ANKUB1A6NFN9 424 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 A6NLC8 198 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 B9A039 149 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 MCIDASD6RGH6 385 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ARPC3O15145 178 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 EFNA2O43921 213 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 CDC40O60508 579 aaKnown RBP eCLIP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 OR2J2O76002 312 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 NDUFB2O95178 105 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 PPP1R3DO95685 299 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TXNDC12O95881 172 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 IGHEP01854 428 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 CSTBP04080 98 aaKnown RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 CD63P08962 238 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 LIMS3P0CW19 117 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 LIMS4P0CW20 117 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SAGP10523 405 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 PEPDP12955 493 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 RPS2P15880 293 aaKnown RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 PGCP20142 388 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ENPP1P22413 925 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 F8A1P23610 371 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SLC6A6P31641 620 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 FOLR3P41439 243 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 MTNR1AP48039 350 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ETV1P50549 477 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 CCR4P51679 360 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SH3BGRP55822 239 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SUMO3P55854 103 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 MLF1P58340 268 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 RPS18P62269 152 aaKnown RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 RAB40BQ12829 278 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 NFATC3Q12968 1075 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 CHAF1BQ13112 559 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 EIF3IQ13347 325 aaKnown RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ITGADQ13349 1161 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SPCS2Q15005 226 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 QPRTQ15274 297 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SSX1Q16384 188 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TIGD6Q17RP2 521 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TMEM44Q2T9K0 475 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 COL28A1Q2UY09 1125 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 C1QL3Q5VWW1 255 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 BICRALQ6AI39 1079 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 H3F3CQ6NXT2 135 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 NIPAL3Q6P499 406 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 PAQR6Q6TCH4 344 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 DPY19L2P2Q6ZN68 376 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 RTL4Q6ZR62 310 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 NDUFAF7Q7L592 441 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF367Q7RTV3 350 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 OVCH2Q7RTZ1 564 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 FAM122BQ7Z309 247 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 GALNTL5Q7Z4T8 443 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 OAFQ86UD1 273 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 CPOQ8IVL8 374 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 GALNT15Q8N3T1 639 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 STX19Q8N4C7 294 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TMCO5AQ8N6Q1 288 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 EXD3Q8N9H8 876 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 FADS6Q8N9I5 356 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 PROKR2Q8NFJ6 384 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 OR10G3Q8NGC4 313 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 OR5M3Q8NGP4 307 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 MOSPD2Q8NHP6 518 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 POC1BQ8TC44 478 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 RAB2BQ8WUD1 216 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TAAR8Q969N4 342 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 SPACA9Q96E40 222 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 KTI12Q96EK9 354 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-210ENST00000561817 RNFT2Q96EX2 444 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 FAM210AQ96ND0 272 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 OPALINQ96PE5 141 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TSC22D3Q99576 134 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 DEFB126Q9BYW3 111 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 PRRG3Q9BZD7 231 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 NMNAT2Q9BZQ4 307 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 B3GNT4Q9C0J1 378 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 GALNT9Q9HCQ5 603 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 NRIP3Q9NQ35 241 aa5.91□□□□□ -1.46
CAPN3-210ENST00000561817 TAS2R10Q9NYW0 307 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms