RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 BGLAPP02818 100 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 GRPRP30550 384 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 SELENOPP49908 381 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 LTBQ06643 244 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 ENTPD8Q5MY95 495 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 H1FNTQ75WM6 255 aaPredicted RBP13.6□□□□□ -0.23
CCDC113-203ENST00000561517 RBM45Q8IUH3 476 aaKnown RBP13.6□□□□□ -0.23
CCDC113-203ENST00000561517 KDM8Q8N371 416 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 C17orf78Q8N4C9 275 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 POU5F2Q8N7G0 328 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 WDR31Q8NA23 367 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 ZNF417Q8TAU3 575 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 RNF217Q8TC41 542 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 AKAP1Q92667 903 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC113-203ENST00000561517 RCN3Q96D15 328 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 ZNF587Q96SQ5 575 aaPredicted RBP13.6□□□□□ -0.23
CCDC113-203ENST00000561517 USP22Q9UPT9 525 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 RCE1Q9Y256 329 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 CORINQ9Y5Q5 1042 aa13.6□□□□□ -0.23
CCDC113-203ENST00000561517 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 SMPD2O60906 423 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 TMCC2O75069 709 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 ZNF432O94892 652 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 THY1P04216 161 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 COX4I1P13073 169 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 CD99P14209 185 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 ZNF43P17038 809 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 C9orf135Q5VTT2 229 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 SHEQ5VZ18 495 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 NIPAL3Q6P499 406 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 ABHD12BQ7Z5M8 362 aaPredicted RBP13.59□□□□□ -0.23
CCDC113-203ENST00000561517 TSPYL5Q86VY4 417 aaPredicted RBP13.59□□□□□ -0.23
CCDC113-203ENST00000561517 SCAIQ8N9R8 606 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 OR52N5Q8NH56 324 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 VANGL1Q8TAA9 524 aaPredicted RBP13.59□□□□□ -0.23
CCDC113-203ENST00000561517 ADAMTS16Q8TE57 1224 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 SLC17A5Q9NRA2 495 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 AP3M1Q9Y2T2 418 aa13.59□□□□□ -0.23
CCDC113-203ENST00000561517 SETD2Q9BYW2 2564 aaPredicted RBP13.59□□□□□ -0.23
CCDC113-203ENST00000561517 ZNF469Q96JG9 3925 aaPredicted RBP13.58□□□□□ -0.23
CCDC113-203ENST00000561517 TRAPPC13A5PLN9 417 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
CCDC113-203ENST00000561517 MS4A18H0YCH9 400 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 CLOCKO15516 846 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 PAX1P15863 534 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 SEC24CP53992 1094 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 CLDN17P56750 224 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
CCDC113-203ENST00000561517 FOXD4Q12950 439 aaPredicted RBP13.58□□□□□ -0.24
CCDC113-203ENST00000561517 MS4A18Q3C1V0 323 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 ZNF672Q499Z4 452 aaPredicted RBP13.58□□□□□ -0.24
CCDC113-203ENST00000561517 WDR88Q6ZMY6 472 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 SPATA21Q7Z572 469 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 ARPINQ7Z6K5 226 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 TREML1Q86YW5 311 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 WFDC11Q8NEX6 87 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 PROX1Q92786 737 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 FBXW5Q969U6 566 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 MPP4Q96JB8 637 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 MOGAT1Q96PD6 335 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 ELAC2Q9BQ52 826 aaKnown RBP13.58□□□□□ -0.24
CCDC113-203ENST00000561517 ZNF426Q9BUY5 554 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 GSX2Q9BZM3 304 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 CMTM6Q9NX76 183 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
CCDC113-203ENST00000561517 BAG5Q9UL15 447 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 AMDHD2Q9Y303 409 aa13.58□□□□□ -0.24
CCDC113-203ENST00000561517 ARFGEF3Q5TH69 2177 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 A0A1W2PR80 420 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 SHISA9B4DS77 424 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 ZNF587BE7ETH6 402 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 ARHGEF9O43307 516 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 TRAF3IP2O43734 574 aaPredicted RBP13.57□□□□□ -0.24
CCDC113-203ENST00000561517 UPK3AO75631 287 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 HPRP00739 348 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 IFNA14P01570 189 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 DANCRP0C864 163 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 PTNP21246 168 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 CBLP22681 906 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 PTAFRP25105 342 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 KDELR2P33947 212 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 LGALS3BPQ08380 585 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 C1DQ13901 141 aaKnown RBP13.57□□□□□ -0.24
CCDC113-203ENST00000561517 C8orf82Q6P1X6 216 aaPredicted RBP13.57□□□□□ -0.24
CCDC113-203ENST00000561517 TMEM108Q6UXF1 575 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 NHLRC1Q6VVB1 395 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 CARM1Q86X55 608 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 SLC15A3Q8IY34 581 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 MICU2Q8IYU8 434 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 KBTBD8Q8NFY9 601 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 TMEM171Q8WVE6 324 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 NEUROG1Q92886 237 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 ASPNQ9BXN1 380 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 MYLK2Q9H1R3 596 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 DLL4Q9NR61 685 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms