RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 NRMQ8IXM6 262 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 DEPDC4Q8N2C3 294 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 MARVELD2Q8N4S9 558 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 OR4D11Q8NGI4 311 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 OR2T29Q8NH02 315 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 SLC7A6OSQ96CW6 309 aaPredicted RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 STARD4Q96DR4 205 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 RBP7Q96R05 134 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 KLHDC3Q9BQ90 382 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 PSD2Q9BQI7 771 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 CADM1Q9BY67 442 aaKnown RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 OPN3Q9H1Y3 402 aaPredicted RBP9.54□□□□□ -0.88
TPM1-229ENST00000561242 NDUFAF4Q9P032 175 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 GRHPRQ9UBQ7 328 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 A4GNTQ9UNA3 340 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 ORC6Q9Y5N6 252 aa9.54□□□□□ -0.88
TPM1-229ENST00000561242 WIPF3A6NGB9 483 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 UNC119BA6NIH7 251 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 A6NIZ1 184 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 A8MXE2 369 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 VSTM5A8MXK1 200 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 TOXO94900 526 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 DIRAS1O95057 198 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 FARS2O95363 451 aaKnown RBP9.53□□□□□ -0.88
TPM1-229ENST00000561242 WNT11O96014 354 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 ADAP00813 363 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 IGF2P01344 180 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 IGHG1P01857 330 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 CDH2P19022 906 aaPredicted RBP9.53□□□□□ -0.88
TPM1-229ENST00000561242 FASP25445 335 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
TPM1-229ENST00000561242 CAPZA2P47755 286 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 RPS6KA3P51812 740 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 SLC16A1P53985 500 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 RAP1BP61224 184 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 RAP1AP62834 184 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 MS4A2Q01362 244 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 PRKCDQ05655 676 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 SLC17A1Q14916 467 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 STK11Q15831 433 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 CARD17Q5XLA6 110 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 FAM205BPQ63HN1 556 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 RPL13AP3Q6NVV1 102 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 ZFP1Q6P2D0 407 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 VWA1Q6PCB0 445 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 PODNL1Q6PEZ8 512 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 KLHL17Q6TDP4 642 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 SEM1Q6ZVN7 128 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 CREB3L2Q70SY1 520 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 KDM8Q8N371 416 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 OR51A7Q8NH64 312 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 PFN4Q8NHR9 129 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 FNDC8Q8TC99 324 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 NANOS1Q8WY41 292 aaKnown RBP9.53□□□□□ -0.88
TPM1-229ENST00000561242 ZNF566Q969W8 418 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 SLCO5A1Q9H2Y9 848 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 MOV10Q9HCE1 1003 aaKnown RBP9.53□□□□□ -0.88
TPM1-229ENST00000561242 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.53□□□□□ -0.88
TPM1-229ENST00000561242 RCE1Q9Y256 329 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 AP4S1Q9Y587 144 aa9.53□□□□□ -0.88
TPM1-229ENST00000561242 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 ASPMQ8IZT6 3477 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 IGKV3D-15A0A087WSY6 115 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 H0YHG0 523 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 PLPP3O14495 311 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 NPIPB7O75200 414 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 NDUFB2O95178 105 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 BGLAPP02818 100 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 SLC6A6P31641 620 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 OR3A2P47893 321 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 CSNK1A1P48729 337 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 CENPAP49450 140 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 BIDP55957 195 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 CTXN1P60606 82 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 VLDLRP98155 873 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 SORDQ00796 357 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 ZP4Q12836 540 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 TOP3AQ13472 1001 aaPredicted RBP9.52□□□□□ -0.89
TPM1-229ENST00000561242 POU4F3Q15319 338 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 FXNQ16595 210 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 ZSCAN26Q16670 478 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 ZBED5Q49AG3 693 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 ABLIM2Q6H8Q1 611 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 LINC00114Q6XXX2 140 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 Q6ZT83 130 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 SLC35D2Q76EJ3 337 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 PIWIL3Q7Z3Z3 882 aaKnown RBP9.52□□□□□ -0.89
TPM1-229ENST00000561242 NUFIP2Q7Z417 695 aaKnown RBP9.52□□□□□ -0.89
TPM1-229ENST00000561242 YTHDF3Q7Z739 585 aaKnown RBP9.52□□□□□ -0.89
TPM1-229ENST00000561242 COMTD1Q86VU5 262 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 JAZF1Q86VZ6 243 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 ATG16L2Q8NAA4 619 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 OR4K5Q8NGD3 323 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 GIPC3Q8TF64 312 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 FAM222BQ8WU58 562 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 CANT1Q8WVQ1 401 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 HSD17B8Q92506 261 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 TMEM45BQ96B21 275 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 SPOCK3Q9BQ16 436 aa9.52□□□□□ -0.89
TPM1-229ENST00000561242 POLDIP3Q9BY77 421 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms