RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 ZBED6CLQ96FA7 236 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 SFRP2Q96HF1 295 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 MS4A14Q96JA4 679 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 VSTM2LQ96N03 204 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 KLF6Q99612 283 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 ECSITQ9BQ95 431 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 FUCA2Q9BTY2 467 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 NUDT9Q9BW91 350 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 C1QTNF1Q9BXJ1 281 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 ING2Q9H160 280 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 DCLRE1BQ9H816 532 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D17Q9HA65 648 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TRIM36Q9NQ86 728 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 SERTAD4Q9NUC0 356 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 MRPS18AQ9NVS2 196 aaKnown RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 GLTPQ9NZD2 209 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TFCP2L1Q9NZI6 479 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 OR12D3Q9UGF7 316 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SLC12A6Q9UHW9 1150 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 NPIPA1Q9UND3 350 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 MEMO1Q9Y316 297 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CDY1Q9Y6F8 540 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CDH10Q9Y6N8 788 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SHROOM2Q13796 1616 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TOPBP1Q92547 1522 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 LRRC7Q96NW7 1537 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 MAGI1Q96QZ7 1491 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3DA0A087WVF3 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3IA0A087WXS9 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 A0A087X0K7 114 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 C1orf226A1L170 272 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 VPS37CA5D8V6 355 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3BA6NDS4 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CCDC160A6NGH7 325 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 MBD3L5A6NJ08 208 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 NPIPB5A8MRT5 1133 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3LB9A6J9 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 PROB1E7EW31 1015 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 KPNA4O00629 521 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 SLC16A4O15374 487 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 RGS5O15539 181 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 RAD51CO43502 376 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 RAD1O60671 282 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 PRAF2O60831 178 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CREG1O75629 220 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 GLSO94925 669 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 FAM107AO95990 144 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 PRKCGP05129 697 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CHRM4P08173 479 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3HP0C7X1 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 VPREB1P12018 145 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 HGFP14210 728 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 ATP1B2P14415 290 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 MYOGP15173 224 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SPI1P17947 270 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CA4P22748 312 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 GABRR1P24046 479 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 ADORA1P30542 326 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CEACAM8P31997 349 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 CCKBRP32239 447 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TNFRSF4P43489 277 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 IER3P46695 156 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 GABRA4P48169 554 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SOX2P48431 317 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TTPAP49638 278 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 ASCL1P50553 236 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CLDN18P56856 261 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TAS2R41P59536 307 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 DNAJB13P59910 316 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 PLP1P60201 277 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 RPL15P61313 204 aaKnown RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 POLR2LP62875 67 aaKnown RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 GTF2BQ00403 316 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CD300CQ08708 224 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SLC10A7Q0GE19 358 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 HSPB3Q12988 150 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 PRPSAP1Q14558 356 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 PTGES3Q15185 160 aaKnown RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 RNPS1Q15287 305 aaKnown RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 RPE65Q16518 533 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 MGAT5BQ3V5L5 792 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 AGKQ53H12 422 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CARD16Q5EG05 197 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 RNASE10Q5GAN6 216 aaKnown RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 C9orf135Q5VTT2 229 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SDHAF4Q5VUM1 108 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 UBE2UQ5VVX9 321 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 LEMD1Q68G75 181 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3GQ6DHY5 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 OR4F3Q6IEY1 312 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TBC1D3CQ6IPX1 549 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 CAPN13Q6MZZ7 669 aaPredicted RBP2.26□□□□□ -2.05
RNF111-211ENST00000560952 LRRC8EQ6NSJ5 796 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TMEM65Q6PI78 240 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 DHRS4L2Q6PKH6 230 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 BTNL8Q6UX41 500 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 TMEM179Q6ZVK1 233 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 SLC16A13Q7RTY0 426 aa2.26□□□□□ -2.05
RNF111-211ENST00000560952 NUFIP2Q7Z417 695 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms