RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NFKBIDQ8NI38 313 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 MAGEE2Q8TD90 523 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-214ENST00000560402 SLC25A43Q8WUT9 341 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-214ENST00000560402 GEMIN6Q8WXD5 167 aaKnown RBP12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ST8SIA1Q92185 356 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 NRBF2Q96F24 287 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF607Q96SK3 696 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 PSD2Q9BQI7 771 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ADI1Q9BV57 179 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ANKRD60Q9BZ19 345 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 REEP1Q9H902 201 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 IL1RAPQ9NPH3 570 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 LAMP3Q9UQV4 416 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 SERINC4A6NH21 518 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 INAFM1C9JVW0 142 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 H0YAE9 185 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 OVOL3O00110 214 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 OIP5O43482 229 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 EFNA2O43921 213 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 CYTIPO60759 359 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 SERPINB7O75635 380 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 AGR2O95994 175 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 THRBP10828 461 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 CAPGP40121 348 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 OR3A2P47893 321 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 SELENOWP63302 87 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 MERTKQ12866 999 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 QPRTQ15274 297 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 TOMM34Q15785 309 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF141Q15928 474 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF672Q499Z4 452 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 COX20Q5RI15 118 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 OTUD3Q5T2D3 398 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 TTC23Q5W5X9 447 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 BHLHA15Q7RTS1 189 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 PIWIL3Q7Z3Z3 882 aaKnown RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 ARMC8Q8IUR7 673 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 C10orf111Q8N326 155 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 CYGBQ8WWM9 190 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 TMEM234Q8WY98 164 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 GTPBP3Q969Y2 492 aaKnown RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 SDF2Q99470 211 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 SLC29A1Q99808 456 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 SERINC1Q9NRX5 453 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 USE1Q9NZ43 259 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 CALML5Q9NZT1 146 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 KIF17Q9P2E2 1029 aa12.02□□□□□ -0.49
SMAD3-214ENST00000560402 FAM32AQ9Y421 112 aaKnown RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 SPIN1Q9Y657 262 aaPredicted RBP12.02□□□□□ -0.49
SMAD3-214ENST00000560402 CR1P17927 2039 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF724A8MTY0 619 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 PDLIM1O00151 329 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 STX11O75558 287 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 ADAP00813 363 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 GUSBP08236 651 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 DANCRP0C864 163 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 PGCP20142 388 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 COX5AP20674 150 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 ENPP1P22413 925 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 IDUAP35475 653 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 RPS6KA3P51812 740 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 MVDP53602 400 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 CSNK2A1P68400 391 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-214ENST00000560402 RASGEF1BQ0VAM2 473 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 SKP2Q13309 424 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 CLEC12BQ2HXU8 276 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 NDUFAF6Q330K2 333 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 PDZK1Q5T2W1 519 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 ATAD3BQ5T9A4 648 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 SHQ1Q6PI26 577 aaKnown RBP12.01□□□□□ -0.49
SMAD3-214ENST00000560402 CYP4Z1Q86W10 505 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 PRIMA1Q86XR5 153 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 FAM86B1Q8N7N1 296 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 OR5D16Q8NGK9 328 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 BBS10Q8TAM1 723 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 OR5B2Q96R09 309 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 GRIP2Q9C0E4 1043 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF350Q9GZX5 532 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 LAT2Q9GZY6 243 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 BARX1Q9HBU1 254 aaPredicted RBP12.01□□□□□ -0.49
SMAD3-214ENST00000560402 POLE3Q9NRF9 147 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 FAIMQ9NVQ4 179 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 EMC3Q9P0I2 261 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 KCNE3Q9Y6H6 103 aa12.01□□□□□ -0.49
SMAD3-214ENST00000560402 A0A1W2PNR3 127 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 SMAD9O15198 467 aaKnown RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 DNPH1O43598 174 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 CSTAP01040 98 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 NUDT7P0C024 238 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 NR2F1P10589 423 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 MATN1P21941 496 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 AQP1P29972 269 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 CRISP3P54108 245 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 HPCAP84074 193 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 BSPH1Q075Z2 132 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 TNK1Q13470 666 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 PPA1Q15181 289 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 TSC22D1Q15714 1073 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms