RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ASPNQ9BXN1 380 aa11□□□□□ -0.65
SNX1-209ENST00000559961 BEX2Q9BXY8 128 aa11□□□□□ -0.65
SNX1-209ENST00000559961 LINC00470Q9BZP3 86 aa11□□□□□ -0.65
SNX1-209ENST00000559961 RAB1BQ9H0U4 201 aa11□□□□□ -0.65
SNX1-209ENST00000559961 MYOZ1Q9NP98 299 aaPredicted RBP11□□□□□ -0.65
SNX1-209ENST00000559961 SLC6A13Q9NSD5 602 aa11□□□□□ -0.65
SNX1-209ENST00000559961 CCDC167Q9P0B6 97 aa11□□□□□ -0.65
SNX1-209ENST00000559961 CDC42EP3Q9UKI2 254 aa11□□□□□ -0.65
SNX1-209ENST00000559961 RCE1Q9Y256 329 aa11□□□□□ -0.65
SNX1-209ENST00000559961 ROS1P08922 2347 aa11□□□□□ -0.65
SNX1-209ENST00000559961 TRAV36DV7A0A075B6V5 113 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 IGHV4-30-2A0A087WSY4 118 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 A0A096LPE4 126 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 A0A1W2PPZ6 126 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ZNF726A6NNF4 738 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 KIAA1324LA8MWY0 1029 aaPredicted RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 B9A039 149 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ATP6V1G2-DDX39BF2Z307 99 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 OR6A2O95222 327 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 USF1P22415 310 aaPredicted RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 RGS8P57771 180 aaPredicted RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 HOXC5Q00444 222 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ROR2Q01974 943 aaKnown RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 LOXL1Q08397 574 aaPredicted RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 MAPK11Q15759 364 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 FAM91A1Q658Y4 838 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 C11orf71Q6IPW1 123 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 VHLLQ6RSH7 139 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ARMC8Q8IUR7 673 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 UEVLDQ8IX04 471 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 IL17RDQ8NFM7 739 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 OR10H5Q8NGA6 315 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 NFKBIDQ8NI38 313 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 MAGEE2Q8TD90 523 aaPredicted RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 BOD1Q96IK1 185 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ANKRD27Q96NW4 1050 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ALKBH3Q96Q83 286 aaPredicted RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 PAIP1Q9H074 479 aaKnown RBP10.99□□□□□ -0.65
SNX1-209ENST00000559961 LPAR3Q9UBY5 353 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 TRIM33Q9UPN9 1127 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 ANGPT4Q9Y264 503 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 SPEF1Q9Y4P9 236 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 CORINQ9Y5Q5 1042 aa10.99□□□□□ -0.65
SNX1-209ENST00000559961 RAI1Q7Z5J4 1906 aaPredicted RBP10.98□□□□□ -0.65
SNX1-209ENST00000559961 ARPC4-TTLL3A0A0A6YYG9 625 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 TMEM229AB2RXF0 380 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 NDUFS8O00217 210 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 ENTPD5O75356 428 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 NUDT7P0C024 238 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 BMP2P12643 396 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 LSP1P33241 339 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 ARR3P36575 388 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 GZMKP49863 264 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 IDH3AP50213 366 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 AQP5P55064 265 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 SCARB2Q14108 478 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 IQCCQ4KMZ1 466 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 AGKQ53H12 422 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 BEND6Q5SZJ8 279 aaPredicted RBP10.98□□□□□ -0.65
SNX1-209ENST00000559961 DHRS4L2Q6PKH6 230 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 B3GLCTQ6Y288 498 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 DNM1P46Q6ZS02 220 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 HIPK1Q86Z02 1210 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 EPHX4Q8IUS5 362 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 ZNF525Q8N782 197 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 LSMEM1Q8N8F7 131 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 SLC26A7Q8TE54 656 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 NANOS1Q8WY41 292 aaKnown RBP10.98□□□□□ -0.65
SNX1-209ENST00000559961 BCL2L2Q92843 193 aaPredicted RBP10.98□□□□□ -0.65
SNX1-209ENST00000559961 SHARPINQ9H0F6 387 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 CA10Q9NS85 328 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 TESQ9UGI8 421 aaKnown RBP10.98□□□□□ -0.65
SNX1-209ENST00000559961 USP22Q9UPT9 525 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 POFUT2Q9Y2G5 429 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 NOX1Q9Y5S8 564 aa10.98□□□□□ -0.65
SNX1-209ENST00000559961 HEATR5AQ86XA9 2040 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 VPS13CQ709C8 3753 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 IGHV1-18A0A0C4DH31 117 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 A0A1B0GWA3 101 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 M0R082 166 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 ANGPT2O15123 496 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 NPIPB7O75200 414 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 UPK3AO75631 287 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 PDE5AO76074 875 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 OR4A8P0C604 315 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 ARAFP10398 606 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 HNF1AP20823 631 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 AHCYP23526 432 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 GRPRP30550 384 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 MRPL19P49406 292 aaKnown RBP10.97□□□□□ -0.65
SNX1-209ENST00000559961 LSM11P83369 360 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNX1-209ENST00000559961 ARF1P84077 181 aaKnown RBP10.97□□□□□ -0.65
SNX1-209ENST00000559961 PMS2P3Q13401 168 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 SQLEQ14534 574 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 CYP51A1Q16850 503 aa10.97□□□□□ -0.65
SNX1-209ENST00000559961 TMEM249Q2WGJ8 235 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms