RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 C6orf141Q5SZD1 244 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ESPNLQ6ZVH7 1005 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 TRILQ7L0X0 811 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 TCEANCQ8N8B7 351 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 IL4I1Q96RQ9 567 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 KATNB1Q9BVA0 655 aa10.94□□□□□ -0.66
HERC1-205ENST00000559886 ALPK2Q86TB3 2170 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 MS4A18H0YCH9 400 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 IDH3BO43837 385 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 AKR7A3O95154 331 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 OR6A2O95222 327 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 F13BP05160 661 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 APEHP13798 732 aaKnown RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 LHX2P50458 406 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 CTXN1P60606 82 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 PUDPQ08623 228 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ZNF239Q16600 458 aaKnown RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 MS4A18Q3C1V0 323 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 RPUSD3Q6P087 351 aaKnown RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 ZNF786Q8N393 782 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 FAM26EQ8N5C1 309 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 KDF1Q8NAX2 398 aaPredicted RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 HDAC2Q92769 488 aaKnown RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 ADGRG7Q96K78 797 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ERMAPQ96PL5 475 aaPredicted RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 DEFB127Q9H1M4 99 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 FANCFQ9NPI8 374 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 CMC2Q9NRP2 79 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ADAM18Q9Y3Q7 739 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 IER3IP1Q9Y5U9 82 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 H0YC42 278 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 TNFSF11O14788 317 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 TFECO14948 347 aaPredicted RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 P2RY4P51582 365 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 SUCLG1P53597 346 aaKnown RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 CLDN15P56746 228 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 CXCR4P61073 352 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ERVK-25P63136 954 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 CSNK2A1P68400 391 aaPredicted RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 H3F3AP84243 136 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 SLC25A30Q5SVS4 291 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ZNF362Q5T0B9 420 aaPredicted RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 SLC35F1Q5T1Q4 408 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ARHGAP11AQ6P4F7 1023 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 PAQR6Q6TCH4 344 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 ASB18Q6ZVZ8 466 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 FAM122BQ7Z309 247 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 NEIL3Q8TAT5 605 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 TMEM163Q8TC26 289 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 YTHDF1Q9BYJ9 559 aaKnown RBP10.93□□□□□ -0.66
HERC1-205ENST00000559886 LIPGQ9Y5X9 500 aa10.93□□□□□ -0.66
HERC1-205ENST00000559886 C11orf98E9PRG8 122 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 RNF13O43567 381 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 DNPH1O43598 174 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 TLX2O43763 284 aaPredicted RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 EIF1BO60739 113 aaKnown RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 SLC2A10O95528 541 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 ACTL6AO96019 429 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 IGHG3P01860 377 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 LYNP07948 512 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 AHCYP23526 432 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 NOS3P29474 1203 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 MLLT10P55197 1068 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 RAC3P60763 192 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 BCL2A1Q16548 175 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 LINC00303Q3SY05 128 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 TMEM201Q5SNT2 666 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 ABTB1Q969K4 478 aaPredicted RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 TAAR6Q96RI8 345 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 INIPQ9NRY2 104 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 TUBD1Q9UJT1 453 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 MYRFQ9Y2G1 1151 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 ZZEF1O43149 2961 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 TRGV5A0A0B4J1U4 118 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 A0A1W2PNV4 684 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 AQP7P3A6NL99 342 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 IMPA2O14732 288 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 SEC14L5O43304 696 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 TNFAIP8O95379 198 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 TXNDC12O95881 172 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 ZNF708P17019 499 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 FMO3P31513 532 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 CLDN18P56856 261 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 INAQ16352 499 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 OCLNQ16625 522 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 SMN1Q16637 294 aaKnown RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 RBM48Q5RL73 367 aaKnown RBP10.92□□□□□ -0.66
HERC1-205ENST00000559886 HBMQ6B0K9 141 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 VASNQ6EMK4 673 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 UBQLNLQ8IYU4 475 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 OR2V1Q8NHB1 315 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 ZNF566Q969W8 418 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 LDAHQ9H6V9 325 aa10.92□□□□□ -0.66
HERC1-205ENST00000559886 CLN6Q9NWW5 311 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms