RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 MALRD1Q5VYJ5 2156 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 NBEAL1Q6ZS30 2694 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 RNF103-CHMP3A0A140T963 221 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TMEM72A0PK05 275 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 ZC3H12DA2A288 527 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 CFLARO15519 480 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 CYP7B1O75881 506 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 CSTAP01040 98 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TP53P04637 393 aaPredicted RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 OR12D1P0DN82 309 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 PTAFRP25105 342 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SOAT1P35610 550 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 APOBEC1P41238 236 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 PTDSS1P48651 473 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 P2RY4P51582 365 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 NUDT6P53370 316 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 EMX2Q04743 252 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 CHRNEQ04844 493 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SLC17A1Q14916 467 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 MAPRE2Q15555 327 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 GSTA3Q16772 222 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 PGS1Q32NB8 556 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 CHRFAM7AQ494W8 412 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SPDYE7PQ495Y7 208 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SPATS1Q496A3 300 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 ATP6AP1LQ52LC2 224 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TSPO2Q5TGU0 170 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 C9orf135Q5VTT2 229 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SAXO2Q658L1 398 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 C16orf89Q6UX73 402 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TMEM108Q6UXF1 575 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 RINLQ6ZS11 566 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 EIF3MQ7L2H7 374 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 ANKRD46Q86W74 232 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 ZNF100Q8IYN0 542 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 MUC15Q8N387 334 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 NATD1Q8N6N6 113 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 RBM15BQ8NDT2 890 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 OR8J2Q8NGG1 315 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SLC25A43Q8WUT9 341 aaPredicted RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 CNOT9Q92600 299 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 APH1AQ96BI3 265 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 MUCL1Q96DR8 90 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 BOD1Q96IK1 185 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 RADILQ96JH8 1075 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SLC35G5Q96KT7 338 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TEX37Q96LM6 180 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 MYCBPQ99417 103 aaPredicted RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 RHNO1Q9BSD3 238 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 INPP5KQ9BT40 448 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SOX7Q9BT81 388 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TCF7L2Q9NQB0 619 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 SLC7A10Q9NS82 523 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 ATAD3AQ9NVI7 634 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TMEM45AQ9NWC5 275 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 ASB6Q9NWX5 421 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TMEM160Q9NX00 188 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 TAS2R16Q9NYV7 291 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 CHRNA9Q9UGM1 479 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 OSGIN1Q9UJX0 560 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 MYRFQ9Y2G1 1151 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 LRCH1Q9Y2L9 728 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 NOSIPQ9Y314 301 aaKnown RBP5.06□□□□□ -1.6
USP3-215ENST00000559771 FLVCR1Q9Y5Y0 555 aa5.06□□□□□ -1.6
USP3-215ENST00000559771 CIB4A0PJX0 185 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 DUXAA6NLW8 204 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ATP6V1G2-DDX39BF2Z307 99 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 M0R1B8 84 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 HMGN4O00479 90 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 RNASET2O00584 256 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 DNPH1O43598 174 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ENTPD5O75356 428 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 AK1P00568 194 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 IFNA2P01563 188 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 CHRM4P08173 479 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 IGFBP1P08833 259 aaPredicted RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 ALDOCP09972 364 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 KITP10721 976 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 PGCP20142 388 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 CCNA2P20248 432 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 RPS4Y1P22090 263 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 IGFBP5P24593 272 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 IL12AP29459 219 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 RYKP34925 604 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 IDH2P48735 452 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 FABP6P51161 128 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ATP4BP51164 291 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 EFNA4P52798 201 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 MVDP53602 400 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 DSCR9P59020 149 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 CSNK2A1P68400 391 aaPredicted RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 KCNJ10P78508 379 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 MXRA7P84157 204 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 LGALS3BPQ08380 585 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 KPNB1Q14974 876 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 RAB35Q15286 201 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TAF11Q15544 211 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SYPL1Q16563 259 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SPANXN4Q5MJ08 99 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 C1orf146Q5VVC0 180 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms