RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 C5orf46Q6UWT4 87 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 HDXQ7Z353 690 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 HIPK4Q8NE63 616 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 ZNF417Q8TAU3 575 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 DNAJA4Q8WW22 397 aaPredicted RBP13.2□□□□□ -0.3
SMAD6-203ENST00000558937 TAAR8Q969N4 342 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 BOD1Q96IK1 185 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 ADAD1Q96M93 576 aaKnown RBP13.2□□□□□ -0.3
SMAD6-203ENST00000558937 ZNF587Q96SQ5 575 aaPredicted RBP13.2□□□□□ -0.3
SMAD6-203ENST00000558937 LINC00470Q9BZP3 86 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 ZNF385DQ9H6B1 395 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 FKRPQ9H9S5 495 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 OBP2BQ9NPH6 170 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 B3GAT1Q9P2W7 334 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
SMAD6-203ENST00000558937 RCE1Q9Y256 329 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 ANGPT4Q9Y264 503 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 ABCA2Q9BZC7 2435 aa13.2□□□□□ -0.3
SMAD6-203ENST00000558937 TRAV36DV7A0A075B6V5 113 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 PRORSD1PA6NEY8 169 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 OR6C65A6NJZ3 312 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 AIM2O14862 343 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 OR2T1O43869 369 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 SSX4O60224 188 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 ZNF43P17038 809 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 GRPRP30550 384 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 DMTNQ08495 405 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 SELPLGQ14242 412 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 RETREG3Q86VR2 466 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 PTOV1Q86YD1 416 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 ARMC8Q8IUR7 673 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 BCL2L2Q92843 193 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-203ENST00000558937 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 ZNF607Q96SK3 696 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 WFDC6Q9BQY6 131 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 NELFAQ9H3P2 528 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 VIPAS39Q9H9C1 493 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 KLHL14Q9P2G3 628 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 SLC13A4Q9UKG4 626 aa13.19□□□□□ -0.3
SMAD6-203ENST00000558937 A0A0B4J2E0 115 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 A0A1B0GX12 115 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 TPST2O60704 377 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 EDF1O60869 148 aaKnown RBP13.18□□□□□ -0.3
SMAD6-203ENST00000558937 SERPINB7O75635 380 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ZNF432O94892 652 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-203ENST00000558937 CBLP22681 906 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 NUDT6P53370 316 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 PCBP3P57721 371 aaKnown RBP13.18□□□□□ -0.3
SMAD6-203ENST00000558937 MTPNP58546 118 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 TUBA1BP68363 451 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 TUBA4AP68366 448 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ROR2Q01974 943 aaKnown RBP13.18□□□□□ -0.3
SMAD6-203ENST00000558937 OR1Q1Q15612 314 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 FAM91A1Q658Y4 838 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 HMBOX1Q6NT76 420 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ULK3Q6PHR2 472 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 DPP10Q8N608 796 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 C11orf65Q8NCR3 313 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 BHLHE22Q8NFJ8 381 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-203ENST00000558937 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 SLC47A1Q96FL8 570 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 SLC38A2Q96QD8 506 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 CGREF1Q99674 301 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 TMEM27Q9HBJ8 222 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 NPHS2Q9NP85 383 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-203ENST00000558937 MOKQ9UQ07 419 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ZANQ9Y493 2812 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ABCA1O95477 2261 aa13.18□□□□□ -0.3
SMAD6-203ENST00000558937 ARFGEF3Q5TH69 2177 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 A0A087WUJ7 227 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 A0A096LPE4 126 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 ARPC4-TTLL3A0A0A6YYG9 625 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 IGHV1-18A0A0C4DH31 117 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 A0A1W2PPZ6 126 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 H7C417 338 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 ANGPT2O15123 496 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 TRAF3IP2O43734 574 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-203ENST00000558937 SLC43A1O75387 559 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 MFN2O95140 757 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 BGLAPP02818 100 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 OPN1SWP03999 348 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-203ENST00000558937 UBE2NP61088 152 aaKnown RBP13.17□□□□□ -0.3
SMAD6-203ENST00000558937 IL1RL1Q01638 556 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 RBBP4Q09028 425 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
SMAD6-203ENST00000558937 CYP51A1Q16850 503 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 H1FNTQ75WM6 255 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-203ENST00000558937 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-203ENST00000558937 PRIMA1Q86XR5 153 aa13.17□□□□□ -0.3
SMAD6-203ENST00000558937 SMYD1Q8NB12 490 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms