RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 LRRC23Q53EV4 343 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 FAM69AQ5T7M9 428 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 C9orf135Q5VTT2 229 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 ERICH5Q6P6B1 374 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 TMEM123Q8N131 208 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 BHLHE22Q8NFJ8 381 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 TMEM255BQ8WV15 326 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 ZHX1-C8orf76Q96EF9 292 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 C7orf34Q96L11 122 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 MUS81Q96NY9 551 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 SF3B5Q9BWJ5 86 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 TMEM27Q9HBJ8 222 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 ST6GALNAC2Q9UJ37 374 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 PLEKHA6Q9Y2H5 1048 aa11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
RABGGTA-207ENST00000558936 LOC102725191A0A1B0GVB3 256 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 TRAPPC13A5PLN9 417 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 PLPP3O14495 311 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 ATE1O95260 518 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 AHSA1O95433 338 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 FAM107AO95990 144 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 ASAH2BP0C7U1 165 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 ZNF26P17031 533 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 CD53P19397 219 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 FAPQ12884 760 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 P2RY6Q15077 328 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 INTS11Q5TA45 600 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 FBXW10Q5XX13 1052 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 RINLQ6ZS11 566 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 BHLHA15Q7RTS1 189 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 GPAT4Q86UL3 456 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 PIK3IP1Q96FE7 263 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 NAA11Q9BSU3 229 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 CCM2LQ9NUG4 571 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 MRGBPQ9NV56 204 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 RHCGQ9UBD6 479 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 RIMS3Q9UJD0 308 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 SLC25A15Q9Y619 301 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 RTTNQ86VV8 2226 aa11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 MAP1AP78559 2803 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-207ENST00000558936 MED13LQ71F56 2210 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 PLCE1Q9P212 2302 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 KPNA4O00629 521 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 GPR171O14626 319 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 MRPL33O75394 65 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 RAD51DO75771 328 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 CH25HO95992 272 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 SERPINA1P01009 418 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 RUNX1T1Q06455 604 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 SPOCK1Q08629 439 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 NCMAPQ5T1S8 102 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 SWT1Q5T5J6 900 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 TBPL2Q6SJ96 375 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 DEF8Q6ZN54 512 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 H1FNTQ75WM6 255 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 MYPOPQ86VE0 399 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 RANBP3LQ86VV4 465 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 WFDC8Q8IUA0 241 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 STEAP2Q8NFT2 490 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 NINJ1Q92982 152 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 APH1AQ96BI3 265 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 CMTM5Q96DZ9 223 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 PLPPR2Q96GM1 343 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 BOD1Q96IK1 185 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 TPD52L3Q96J77 140 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 OXGR1Q96P68 337 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 OR2M2Q96R28 347 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 FUZQ9BT04 418 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 MED29Q9NX70 200 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 MRPL39Q9NYK5 338 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 EMC3Q9P0I2 261 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 TAGLN3Q9UI15 199 aa11.09□□□□□ -0.63
RABGGTA-207ENST00000558936 USF3Q68DE3 2245 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 OR5H1A6NKK0 313 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 CNOT4O95628 575 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 HSD17B1P14061 328 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 MAKP20794 623 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 CLDN17P56750 224 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 VLDLRP98155 873 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 MS4A2Q01362 244 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 FOXD4Q12950 439 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 KRT72Q14CN4 511 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 TMEM225Q6GV28 225 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 GLYATQ6IB77 296 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 PAMR1Q6UXH9 720 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 AAED1Q7RTV5 226 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 ZNF100Q8IYN0 542 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 PGAM4Q8N0Y7 254 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 LRRC75AQ8NAA5 344 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 ADPRHL1Q8NDY3 354 aa11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 KISS1RQ969F8 398 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-207ENST00000558936 HSH2DQ96JZ2 352 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms