RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 REG4Q9BYZ8 158 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 MANSC1Q9H8J5 431 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 FKRPQ9H9S5 495 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 TPT1P8Q9HAU6 139 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 SDR39U1Q9NRG7 319 aaPredicted RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 CBLN4Q9NTU7 201 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 IFT52Q9Y366 437 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 PLCE1Q9P212 2302 aa7.08□□□□□ -1.28
TRAF3-205ENST00000558700 CHD3Q12873 2000 aaKnown RBP7.08□□□□□ -1.28
TRAF3-205ENST00000558700 LIPT2A6NK58 231 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 A8MVM7 634 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 PDLIM1O00151 329 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 KLF11O14901 512 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 POLR3GO15318 223 aaPredicted RBP7.07□□□□□ -1.28
TRAF3-205ENST00000558700 KRT33AO76009 404 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 VAMP5O95183 116 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 AHSA1O95433 338 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 WNT11O96014 354 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 C1QCP02747 245 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 CD40P25942 277 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 GTF2E2P29084 291 aaKnown RBP7.07□□□□□ -1.28
TRAF3-205ENST00000558700 MPGP29372 298 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 MVDP53602 400 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 FADDQ13158 208 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 OR7A5Q15622 319 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 GTDC1Q4AE62 458 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 SLC9B1Q4ZJI4 515 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 C9orf135Q5VTT2 229 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 PRAMEF8Q5VWM4 474 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 PRAMEF7Q5VXH5 474 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 CDPF1Q6NVV7 123 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF544Q6NX49 715 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 CLEC2AQ6UVW9 174 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 FKBP9P1Q75LS8 142 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 MAVSQ7Z434 540 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 MIER2Q8N344 545 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 POMGNT2Q8NAT1 580 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 OR9K2Q8NGE7 335 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 OR9I1Q8NGQ6 314 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 BBS10Q8TAM1 723 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 SLC38A5Q8WUX1 472 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 SLC35B4Q969S0 331 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 ZBTB9Q96C00 473 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 TLCD1Q96CP7 247 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 AURKBQ96GD4 344 aaPredicted RBP7.07□□□□□ -1.28
TRAF3-205ENST00000558700 TMEM19Q96HH6 336 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 DHRS9Q9BPW9 319 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 OBP2BQ9NPH6 170 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 SLC17A5Q9NRA2 495 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 SLC7A10Q9NS82 523 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 SLC6A13Q9NSD5 602 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 ADPRHL2Q9NX46 363 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 USH1CQ9Y6N9 552 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 CSPG4Q6UVK1 2322 aa7.07□□□□□ -1.28
TRAF3-205ENST00000558700 VPS13CQ709C8 3753 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 A0A0G2JPF8 293 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 A0A1W2PR80 420 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 OR6C65A6NJZ3 312 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 HNRNPCL2B2RXH8 293 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 HNRNPCL3B7ZW38 293 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 C5orf58C9J3I9 102 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF587BE7ETH6 402 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 H7C417 338 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TLX2O43763 284 aaPredicted RBP7.06□□□□□ -1.28
TRAF3-205ENST00000558700 HNRNPCL1O60812 293 aaKnown RBP7.06□□□□□ -1.28
TRAF3-205ENST00000558700 CRLF1O75462 422 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 AKR7A3O95154 331 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 CD8AP01732 235 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 CSF3P09919 207 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TFPTP0C1Z6 253 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 GKN3PP0CG01 181 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 HNRNPCL4P0DMR1 293 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 PAX7P23759 505 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TTKP33981 857 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 MRPL19P49406 292 aaKnown RBP7.06□□□□□ -1.28
TRAF3-205ENST00000558700 FABP6P51161 128 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 FOXG1P55316 489 aaPredicted RBP7.06□□□□□ -1.28
TRAF3-205ENST00000558700 DSCR9P59020 149 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 PRPS1P60891 318 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 NCALDP61601 193 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 KRTAP1-1Q07627 177 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 CEACAM7Q14002 265 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 MAPK11Q15759 364 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 GFOD2Q3B7J2 385 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF311Q5JNZ3 666 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TSPO2Q5TGU0 170 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 C1orf140Q5VVS0 124 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 C11orf71Q6IPW1 123 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 B3GLCTQ6Y288 498 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 AAED1Q7RTV5 226 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 GPAT4Q86UL3 456 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 MUC15Q8N387 334 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 TMEM99Q8N816 258 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 MAPK1IP1LQ8NDC0 245 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 VPS33AQ96AX1 596 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 C3orf49Q96BT1 292 aa7.06□□□□□ -1.28
TRAF3-205ENST00000558700 C7orf26Q96N11 449 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms