RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PRPS1L1P21108 318 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TBXA2RP21731 343 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 IL12BP29460 328 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 NTSP30990 170 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CEACAM8P31997 349 aaPredicted RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 S100A3P33764 101 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SOAT1P35610 550 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SERPINB5P36952 375 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ASMTP46597 345 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SLC18A1P54219 525 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 AQP5P55064 265 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 HOXC5Q00444 222 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ZNF117Q03924 483 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ZNF91Q05481 1191 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 RBPJQ06330 500 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 DECR1Q16698 335 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TMEM44Q2T9K0 475 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TBRG1Q3YBR2 411 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ANXA2RQ3ZCQ2 193 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 VPS26BQ4G0F5 336 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ACSF3Q4G176 576 aaPredicted RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 KLHL26Q53HC5 615 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 PDZK1Q5T2W1 519 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 C1orf185Q5T7R7 199 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 WLSQ5T9L3 541 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 C6orf163Q5TEZ5 329 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TYW3Q6IPR3 259 aaKnown RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 TMEM81Q6P7N7 255 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 R3HCC1LQ7Z5L2 792 aaKnown RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 MOGAT3Q86VF5 341 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 LRRC34Q8IZ02 419 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 GCNT2Q8N0V5 402 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CLIP4Q8N3C7 705 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 OR8J2Q8NGG1 315 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 OR14L1PQ8NHC6 308 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CEP70Q8NHQ1 597 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 GPR119Q8TDV5 335 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ADAMTS15Q8TE58 950 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ROBO4Q8WZ75 1007 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SMPDL3BQ92485 455 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CNOT9Q92600 299 aaKnown RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 INTS12Q96CB8 462 aaKnown RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 TMCO6Q96DC7 493 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 MTERF3Q96E29 417 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 METTL2AQ96IZ6 378 aaKnown RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 ZNF597Q96LX8 424 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 OR52E6Q96RD3 313 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SIGLEC11Q96RL6 698 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ZNF347Q96SE7 839 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 OR2B2Q9GZK3 357 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 PAIP1Q9H074 479 aaKnown RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 RABEP2Q9H5N1 569 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 IKZF5Q9H5V7 419 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 C3orf14Q9HBI5 128 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 NKIRAS1Q9NYS0 192 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SLC25A37Q9NYZ2 338 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 NDUFAF4Q9P032 175 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 BOKQ9UMX3 212 aaPredicted RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 CFL2Q9Y281 166 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TMED5Q9Y3A6 229 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ROS1P08922 2347 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TEX15Q9BXT5 2789 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 LRBAP50851 2863 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 IGHV3-15A0A0B4J1V0 119 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 RNF103-CHMP3A0A140T963 221 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 DNAJC9-AS1A6NH13 148 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 FAM90A20PA6NIJ5 464 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 MBD3L5A6NJ08 208 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 ZNF814B7Z6K7 855 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 AP3D1O14617 1153 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 KLF11O14901 512 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 UBDO15205 165 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SEC14L5O43304 696 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CXCL13O43927 109 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 TPST1O60507 370 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 TPST2O60704 377 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 HCN1O60741 890 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 RAMP1O60894 148 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 GCM2O75603 506 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 SLC22A3O75751 556 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 LINGO3P0C6S8 592 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 GKN3PP0CG01 181 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 PRG2P13727 222 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CPN1P15169 458 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ZNF708P17019 499 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CCNA2P20248 432 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 UQCRC2P22695 453 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 SRD5A2P31213 254 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 RYKP34925 604 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 HPCAL1P37235 193 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 CPA2P48052 419 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 POLR2JP52435 117 aaKnown RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 ATP12AP54707 1039 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 FOXG1P55316 489 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 DSCR4P56555 118 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 SSBP2P81877 361 aaPredicted RBP3.77□□□□□ -1.81
SPG11-211ENST00000558561 FAM27E3Q08E93 113 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 C17orf67Q0P5P2 114 aa3.77□□□□□ -1.81
SPG11-211ENST00000558561 ART3Q13508 389 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms