RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CLDN20P56880 219 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 KLRB1Q12918 225 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 POU4F3Q15319 338 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 GPR139Q6DWJ6 353 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 ARHGAP11AQ6P4F7 1023 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 TEX19Q8NA77 164 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 ANKK1Q8NFD2 765 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 OR8J1Q8NGP2 316 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 SMPDL3BQ92485 455 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 MUS81Q96NY9 551 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 TIMP4Q99727 224 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 SF3B5Q9BWJ5 86 aaKnown RBP13.34□□□□□ -0.27
VPS18-202ENST00000558474 POLDIP3Q9BY77 421 aaKnown RBP13.34□□□□□ -0.27
VPS18-202ENST00000558474 PRDM14Q9GZV8 571 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 ZNF71Q9NQZ8 489 aaPredicted RBP13.34□□□□□ -0.27
VPS18-202ENST00000558474 INIPQ9NRY2 104 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 IMPAD1Q9NX62 359 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 NOX1Q9Y5S8 564 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 ANKRD11Q6UB99 2663 aaPredicted RBP13.34□□□□□ -0.27
VPS18-202ENST00000558474 LOC400499M0QZD8 3231 aa13.34□□□□□ -0.27
VPS18-202ENST00000558474 IGF2RP11717 2491 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 MS4A18H0YCH9 400 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 M0R3G1 203 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 RNF13O43567 381 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 IGFBP1P08833 259 aaPredicted RBP13.33□□□□□ -0.28
VPS18-202ENST00000558474 ENPP1P22413 925 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 RPL4P36578 427 aaKnown RBP13.33□□□□□ -0.28
VPS18-202ENST00000558474 STARP49675 285 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 P2RY4P51582 365 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 SUCLG1P53597 346 aaKnown RBP13.33□□□□□ -0.28
VPS18-202ENST00000558474 ISL1P61371 349 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 SNRPGP62308 76 aaKnown RBP13.33□□□□□ -0.28
VPS18-202ENST00000558474 EFNB1P98172 346 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 MYBPC1Q00872 1141 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 SF3B4Q15427 424 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS18-202ENST00000558474 MS4A18Q3C1V0 323 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 NADK2Q4G0N4 442 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 SLC25A30Q5SVS4 291 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 FAM205BPQ63HN1 556 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
VPS18-202ENST00000558474 KRT80Q6KB66 452 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 ACSM5Q6NUN0 579 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 HDDC2Q7Z4H3 204 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 EXD3Q8N9H8 876 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 Q8NA96 180 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 OR10D3Q8NH80 312 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 FBLIM1Q8WUP2 373 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 CRELD1Q96HD1 420 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 GPR137Q96N19 417 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 OXGR1Q96P68 337 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 FN3KQ9H479 309 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 KLHL21Q9UJP4 597 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 LIPGQ9Y5X9 500 aa13.33□□□□□ -0.28
VPS18-202ENST00000558474 A0A1W2PRG6 482 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 MCIDASD6RGH6 385 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 NPIPA5E9PKD4 350 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 SURF4O15260 269 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 AKR7A3O95154 331 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 IFNGP01579 166 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 OPN1LWP04000 364 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 GNAO1P09471 354 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 SDHAP31040 664 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 EIF1AXP47813 144 aaKnown RBP13.32□□□□□ -0.28
VPS18-202ENST00000558474 PCYT1AP49585 367 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 CLDN15P56746 228 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 CTXN1P60606 82 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 CSNK2BP67870 215 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 PDK3Q15120 406 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 CLEC12AQ5QGZ9 265 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 TMEM236Q5W0B7 351 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 TMEM225Q6GV28 225 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 Q6ZPB1 254 aaPredicted RBP13.32□□□□□ -0.28
VPS18-202ENST00000558474 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 FAM122BQ7Z309 247 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 GHDCQ8N2G8 530 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 TMEM99Q8N816 258 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 OR4Q3Q8NH05 313 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 MOSPD2Q8NHP6 518 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 RHOXF1Q8NHV9 184 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 ZPLD1Q8TCW7 415 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 WDYHV1Q96HA8 205 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 Q96MT0 163 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 ERMAPQ96PL5 475 aaPredicted RBP13.32□□□□□ -0.28
VPS18-202ENST00000558474 SNX18Q96RF0 628 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 ENKD1Q9H0I2 346 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 TXNIPQ9H3M7 391 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 SPRR3Q9UBC9 169 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 NPIPA1Q9UND3 350 aa13.32□□□□□ -0.28
VPS18-202ENST00000558474 AHCYL1O43865 530 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 SYNGR4O95473 234 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 AHCYP23526 432 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 NOS3P29474 1203 aa13.31□□□□□ -0.28
VPS18-202ENST00000558474 DAP3P51398 398 aaKnown RBP13.31□□□□□ -0.28
VPS18-202ENST00000558474 CXCR4P61073 352 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms