RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 NTF4P34130 210 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 RBM34P42696 430 aaKnown RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 P2RY4P51582 365 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 SLC7A2P52569 658 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 PSME3P61289 254 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 FAPQ12884 760 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 PMS2P3Q13401 168 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 CYBRD1Q53TN4 286 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 CASP12Q6UXS9 341 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 HIST3H2AQ7L7L0 130 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 CARM1Q86X55 608 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 C10orf53Q8N6V4 93 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 ZNF433Q8N7K0 673 aaPredicted RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 ZIC4Q8N9L1 334 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 VANGL1Q8TAA9 524 aaPredicted RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 HIST1H2ACQ93077 130 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 S100PBPQ96BU1 408 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 SLC41A3Q96GZ6 507 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 BOD1Q96IK1 185 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 RADILQ96JH8 1075 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 MUS81Q96NY9 551 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 KCTD14Q9BQ13 255 aaPredicted RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 WFDC6Q9BQY6 131 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 PTDSS2Q9BVG9 487 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 ESRP2Q9H6T0 727 aaKnown RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 PLEKHF2Q9H8W4 249 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 MRPL39Q9NYK5 338 aaKnown RBP7.49□□□□□ -1.21
TPM1-213ENST00000558400 TAGLN3Q9UI15 199 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 PRSS50Q9UI38 385 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 ST6GALNAC2Q9UJ37 374 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 RCE1Q9Y256 329 aa7.49□□□□□ -1.21
TPM1-213ENST00000558400 ABCA4P78363 2273 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 IGKV1D-42A0A075B6H8 117 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 OR5H1A6NKK0 313 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 CPSF4LA6NMK7 179 aaKnown RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 M0R082 166 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 NME4O00746 187 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 LYZL6O75951 148 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 OR6A2O95222 327 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 RAF1P04049 648 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 THBDP07204 575 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 NQO1P15559 274 aaKnown RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 IGHV1-2P23083 117 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 GSK3BP49841 420 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 CRYBA2P53672 197 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 TAS2R41P59536 307 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 ST3GAL3Q11203 375 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 KEAP1Q14145 624 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 KRT72Q14CN4 511 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 PPA1Q15181 289 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 TAB1Q15750 504 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 LRRC23Q53EV4 343 aaPredicted RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 TSPO2Q5TGU0 170 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 C22orf34Q6ZV56 151 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 FKBP9P1Q75LS8 142 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 CBLL1Q75N03 491 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 PXKQ7Z7A4 578 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 RBM45Q8IUH3 476 aaKnown RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 UEVLDQ8IX04 471 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 C17orf78Q8N4C9 275 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 C1orf162Q8NEQ5 155 aaPredicted RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 OR4D11Q8NGI4 311 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 OR5J2Q8NH18 312 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 PIGTQ969N2 578 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 MBD6Q96DN6 1003 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 PIK3IP1Q96FE7 263 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 TPD52L3Q96J77 140 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 LRR1Q96L50 414 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 ZNF385AQ96PM9 386 aaKnown RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 ZNF426Q9BUY5 554 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 LINC00470Q9BZP3 86 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 SLCO5A1Q9H2Y9 848 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 FKRPQ9H9S5 495 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 MOV10Q9HCE1 1003 aaKnown RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 NANSQ9NR45 359 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 SLC7A10Q9NS82 523 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 ADA2Q9NZK5 511 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 ABCD2Q9UBJ2 740 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 RIMS3Q9UJD0 308 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 RPS6KA6Q9UK32 745 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 ADAM21Q9UKJ8 722 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 SLC7A7Q9UM01 511 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 NOX1Q9Y5S8 564 aa7.48□□□□□ -1.21
TPM1-213ENST00000558400 MAGED1Q9Y5V3 778 aaPredicted RBP7.48□□□□□ -1.21
TPM1-213ENST00000558400 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.47□□□□□ -1.21
TPM1-213ENST00000558400 ZNF726A6NNF4 738 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 ZNF587BE7ETH6 402 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 MS4A18H0YCH9 400 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 RPL36A-HNRNPH2H7BZ11 118 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PDLIM1O00151 329 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 PLPP3O14495 311 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 TMCC2O75069 709 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 SLC43A1O75387 559 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 WNT11O96014 354 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 IGHV3-9P01782 118 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 BGLAPP02818 100 aa7.47□□□□□ -1.21
TPM1-213ENST00000558400 MT-ND1P03886 318 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms