RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RPS26P11Q5JNZ5 115 aaPredicted RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 PGBD2Q6P3X8 592 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 POC5Q8NA72 575 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 C17orf47Q8NEP4 570 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 OR5M9Q8NGP3 310 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 OR9Q1Q8NGQ5 310 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 DIO2Q92813 273 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 OTUB1Q96FW1 271 aaPredicted RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 JSRP1Q96MG2 331 aaPredicted RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 WDFY2Q96P53 400 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 OPALINQ96PE5 141 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 OR5M11Q96RB7 305 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 SDF2Q99470 211 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 ZNF350Q9GZX5 532 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 NUAK2Q9H093 628 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 POLR2J3Q9H1A7 115 aaKnown RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 CHST11Q9NPF2 352 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 ISYNA1Q9NPH2 558 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 INIPQ9NRY2 104 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 MRPS18AQ9NVS2 196 aaKnown RBP9.32□□□□□ -0.92
TPM1-212ENST00000558347 CNIH4Q9P003 139 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 STUB1Q9UNE7 303 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 SLC9A8Q9Y2E8 581 aa9.32□□□□□ -0.92
TPM1-212ENST00000558347 OR14I1A6ND48 311 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 AQP7O14520 342 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TP53I11O14683 189 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TBX1O43435 398 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SUSD5O60279 629 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 OR10H3O60404 316 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TRIM3O75382 744 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 HSMCR30P0CW71 290 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 DRD5P21918 477 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 POU1F1P28069 291 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 ABCD3P28288 659 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 GABRA3P34903 492 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 NRG3P56975 720 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 PSPHP78330 225 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SEC23BQ15437 767 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SPHARQ15513 63 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 ENTPD8Q5MY95 495 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 DCST2Q5T1A1 773 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 NPSR1Q6W5P4 371 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 FRRS1Q6ZNA5 592 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 WDR53Q7Z5U6 358 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 SNX29P2Q8IUI4 249 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 MCEMP1Q8IX19 187 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 COX18Q8N8Q8 333 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 GPR151Q8TDV0 419 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 PRRC1Q96M27 445 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 LDAHQ9H6V9 325 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 MTHFD2LQ9H903 347 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 SMURF1Q9HCE7 757 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 HHATLQ9HCP6 504 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 Q9N2J8 555 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 RYDENQ9NUL5 291 aaKnown RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 NDUFB11Q9NX14 153 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 NPAP1Q9NZP6 1156 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SPRR3Q9UBC9 169 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 BOKQ9UMX3 212 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 A4GNTQ9UNA3 340 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 DIMT1Q9UNQ2 313 aaKnown RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 GPR55Q9Y2T6 319 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 PHF3Q92576 2039 aaKnown RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 ABCA12Q86UK0 2595 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 PDZD2O15018 2839 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TRGV5A0A0B4J1U4 118 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 GXYLT2A0PJZ3 443 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SLC35F4A4IF30 521 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 FRG2CA6NGY1 282 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SNTNA6NMZ2 147 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 M0R129 80 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SYT5O00445 386 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 STX11O75558 287 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 KCNK2O95069 426 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 RAB36O95755 333 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 LGI1O95970 557 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 PSMA1P25786 263 aaKnown RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 IFNGR2P38484 337 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 PCYT1AP49585 367 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 CHRNEQ04844 493 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 ZNF91Q05481 1191 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TMEM44Q2T9K0 475 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 KLHL22Q53GT1 634 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 FNDC7Q5VTL7 733 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 RTL6Q6ICC9 239 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TMEM211Q6ICI0 200 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TYW3Q6IPR3 259 aaKnown RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 ZNF585AQ6P3V2 769 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 DEF8Q6ZN54 512 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SCAIQ8N9R8 606 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 HPS1Q92902 700 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 NTNG2Q96CW9 530 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TMCO6Q96DC7 493 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 LCORQ96JN0 433 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 CEP19Q96LK0 163 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SLC30A2Q9BRI3 323 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms