RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TBCEQ15813 527 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 CNPY1Q3B7I2 92 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 RAET1LQ5VY80 246 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 C3orf33Q6P1S2 294 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 BORAQ6PGQ7 559 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 LSM14AQ8ND56 463 aaKnown RBP18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 OR51L1Q8NGJ5 315 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 ZBTB8AQ96BR9 441 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 NMD3Q96D46 503 aaKnown RBP18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 CDCA4Q9BXL8 241 aa18.39■□□□□ 0.53
SNRPA1-205ENST00000558036 A0A1W2PNR3 127 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 LRRC3CA6NJW4 275 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 ARPC3O15145 178 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 RNF13O43567 381 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 OR2T1O43869 369 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 DSCR4P56555 118 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 OR1C1Q15619 314 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 SGCBQ16585 318 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 TSPAN32Q96QS1 320 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 OR5M11Q96RB7 305 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 SERINC1Q9NRX5 453 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 CBR3O75828 277 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 CASRP41180 1078 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 EIF1P41567 113 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 FOXC1Q12948 553 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 C5orf46Q6UWT4 87 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 GPALPP1Q8IXQ4 340 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 KISS1RQ969F8 398 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 OR5B2Q96R09 309 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 ABI3Q9P2A4 366 aa18.38■□□□□ 0.53
SNRPA1-205ENST00000558036 OR6C68A6NDL8 312 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 H7C1C5 153 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 PLPP3O14495 311 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 RAB36O95755 333 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 IDUAP35475 653 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 RFC3P40938 356 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 CDKN2AP42771 156 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 ETV1P50549 477 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 LCN6P62502 163 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 RAB40BQ12829 278 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 KLHL22Q53GT1 634 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 SYT6Q5T7P8 510 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 UBE2UQ5VVX9 321 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 MEPCEQ7L2J0 689 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 GID4Q8IVV7 300 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 GTPBP8Q8N3Z3 284 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 NPEPL1Q8NDH3 523 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 OR51G2Q8NGK0 314 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 THAP4Q8WY91 577 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 ASPNQ9BXN1 380 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 TIMMDC1Q9NPL8 285 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 GRHPRQ9UBQ7 328 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 RSL24D1Q9UHA3 163 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 DIMT1Q9UNQ2 313 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 DMXL2Q8TDJ6 3036 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 HSMCR30P0CW71 290 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 HLA-DOBP13765 273 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 PAICSP22234 425 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 NR4A1P22736 598 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 SDHAP31040 664 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 ATP6V1E1P36543 226 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 MED22Q15528 200 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 TBC1D25Q3MII6 688 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 TMEM176BQ3YBM2 270 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 ANKDD1AQ495B1 522 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 LEG1Q6P5S2 330 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 YRDCQ86U90 279 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 MFSD8Q8NHS3 518 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 ZNRF4Q8WWF5 429 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 ISOC1Q96CN7 298 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 TEAD3Q99594 435 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 MRPS18AQ9NVS2 196 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 KLHL21Q9UJP4 597 aa18.37■□□□□ 0.53
SNRPA1-205ENST00000558036 A0A087WZY1 265 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 OR2M5A3KFT3 312 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 CCDC182A6NF36 153 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 LIPT2A6NK58 231 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 AKR7A3O95154 331 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 OR6A2O95222 327 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 MRPL3P09001 348 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 SLC2A5P22732 501 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 ADH6P28332 368 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 GTF2E2P29084 291 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 TMEM44Q2T9K0 475 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 MESTQ5EB52 335 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 AGAP7PQ5VUJ5 663 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 SMAP2Q8WU79 429 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 SMPDL3BQ92485 455 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 NXPE2Q96DL1 559 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 AGAP4Q96P64 663 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 FUNDC2Q9BWH2 189 aa18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 MRPL39Q9NYK5 338 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 ZNF346Q9UL40 294 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-205ENST00000558036 CNR1P21554 472 aa18.35■□□□□ 0.53
SNRPA1-205ENST00000558036 TTKP33981 857 aa18.35■□□□□ 0.53
SNRPA1-205ENST00000558036 SELENBP1Q13228 472 aa18.35■□□□□ 0.53
SNRPA1-205ENST00000558036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.35■□□□□ 0.53
SNRPA1-205ENST00000558036 B3GNT6Q6ZMB0 384 aa18.35■□□□□ 0.53
SNRPA1-205ENST00000558036 TSSK2Q96PF2 358 aa18.35■□□□□ 0.53
SNRPA1-205ENST00000558036 DDOQ99489 341 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms