RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 IGHV1-18A0A0C4DH31 117 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 RNF212BA8MTL3 300 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 TMEM229AB2RXF0 380 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 B9A039 149 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 POLR3GO15318 223 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 AKAP8O43823 692 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC43A1O75387 559 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 FAM157CP0CG43 387 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 BMP2P12643 396 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 PRKAR1BP31321 381 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 RPS5P46782 204 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 PDLIM4P50479 330 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 P2RY4P51582 365 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 LSM11P83369 360 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 ROR2Q01974 943 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC46A3Q7Z3Q1 461 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 EPHX4Q8IUS5 362 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 CCDC36Q8IYA8 594 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 GPR137CQ8N3F9 429 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 IL17RDQ8NFM7 739 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 VRK1Q99986 396 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 CA10Q9NS85 328 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 TMEM160Q9NX00 188 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC13A4Q9UKG4 626 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 USH1CQ9Y6N9 552 aa11.87□□□□□ -0.51
SNRPA1-204ENST00000558020 LOC102725191A0A1B0GVB3 256 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 PRORSD1PA6NEY8 169 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 RPL36A-HNRNPH2H7BZ11 118 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 AIM2O14862 343 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 SERPINB7O75635 380 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 PDE5AO76074 875 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 GZMKP49863 264 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 CLDN17P56750 224 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 IL1RL1Q01638 556 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 MST1LQ2TV78 715 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 GTDC1Q4AE62 458 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 REEP3Q6NUK4 255 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 ULK3Q6PHR2 472 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC2A7Q6PXP3 512 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 EPGNQ6UW88 154 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 H1FNTQ75WM6 255 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 LSMEM1Q8N8F7 131 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 PIK3C3Q8NEB9 887 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 BHLHE22Q8NFJ8 381 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 OR9I1Q8NGQ6 314 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC38A4Q969I6 547 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 MAL2Q969L2 176 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 ALKBH3Q96Q83 286 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 ZNF607Q96SK3 696 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 PIMREGQ9BSJ6 248 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 PAIP1Q9H074 479 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 SHARPINQ9H0F6 387 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 RAB1BQ9H0U4 201 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 TCF7L2Q9NQB0 619 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 CORO2BQ9UQ03 480 aa11.86□□□□□ -0.51
SNRPA1-204ENST00000558020 TRAV36DV7A0A075B6V5 113 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 A0A096LNT2 108 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 A0A096LPE4 126 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 A0A1W2PPZ6 126 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 EVPLLA8MZ36 301 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 FTCDNL1E5RQL4 147 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 UPK3AO75631 287 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 NUDT7P0C024 238 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 OR4A8P0C604 315 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 CBR1P16152 277 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC6A2P23975 617 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 ARR3P36575 388 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 NCALDP61601 193 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 HOXC5Q00444 222 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 NAAAQ02083 359 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 GCNT6Q5T4J0 391 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 FAM91A1Q658Y4 838 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 C6orf89Q6UWU4 347 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 MAVSQ7Z434 540 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 SNX32Q86XE0 403 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 KDM8Q8N371 416 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 NANOS1Q8WY41 292 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 TLCD1Q96CP7 247 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 SLC47A1Q96FL8 570 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 ANKRD27Q96NW4 1050 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 EPYCQ99645 322 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 EVA1AQ9H8M9 152 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 TMEM27Q9HBJ8 222 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 TMBIM4Q9HC24 238 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 CRNNQ9UBG3 495 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 CHST2Q9Y4C5 530 aa11.85□□□□□ -0.51
SNRPA1-204ENST00000558020 NR5A2O00482 541 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 LMX1BO60663 402 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 ZNF432O94892 652 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 CECR9P0C854 216 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms