RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SHCBP1LQ9BZQ2 653 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 CNTD2Q9H8S5 307 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 BRF2Q9HAW0 419 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 TMEM165Q9HC07 324 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 ACER3Q9NUN7 267 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 TMEM181Q9P2C4 612 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
NEDD1-211ENST00000557454 VPS29Q9UBQ0 182 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.85□□□□□ -1.15
NEDD1-211ENST00000557454 GPR160Q9UJ42 338 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 NPTNQ9Y639 398 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 HECTD4Q9Y4D8 3996 aa7.85□□□□□ -1.15
NEDD1-211ENST00000557454 SYCE1LA8MT33 242 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 POC1B-GALNT4F8VUJ3 575 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 EIF4E2O60573 245 aaKnown RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 EIF1BO60739 113 aaKnown RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 HLA-HP01893 362 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 UROSP10746 265 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 THRBP10828 461 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 IMPDH2P12268 514 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 CHN1P15882 459 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 CCNA2P20248 432 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 ATP6V1C1P21283 382 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 IVDP26440 423 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GABRA5P31644 462 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 RPL4P36578 427 aaKnown RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 IER3P46695 156 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 KLF3P57682 345 aaPredicted RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GNB2P62879 340 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 SLC35A1P78382 337 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 POU6F2P78424 691 aaPredicted RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GLO1Q04760 184 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 SLC3A1Q07837 685 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 SKP2Q13309 424 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 NKAPLQ5M9Q1 402 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 ZFAND6Q6FIF0 208 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 RGS7BPQ6MZT1 257 aaPredicted RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 NIPAL3Q6P499 406 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GPAT4Q86UL3 456 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 CMIPQ8IY22 773 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GALNT4Q8N4A0 578 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 KLHL36Q8N4N3 616 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 KLHDC1Q8N7A1 406 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 MGARPQ8TDB4 240 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 TMEM234Q8WY98 164 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 MAP6Q96JE9 813 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 NSUN5Q96P11 429 aaKnown RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 MS4A4EQ96PG1 132 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 DCLRE1CQ96SD1 692 aaKnown RBP7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GPR22Q99680 433 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 CENPHQ9H3R5 247 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 SERHL2Q9H4I8 314 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 NMRAL1Q9HBL8 299 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 NMRK1Q9NWW6 199 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GRHL1Q9NZI5 618 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 GRID1Q9ULK0 1009 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 TRIM33Q9UPN9 1127 aa7.84□□□□□ -1.15
NEDD1-211ENST00000557454 IGLV3-9A0A075B6K5 115 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 TNFRSF13BO14836 293 aaPredicted RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 DNAJA2O60884 412 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 HSPA4LO95757 839 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 IFI6P09912 130 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 OR8G3PP0DMU2 310 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 CD79AP11912 226 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 ZNF14P17017 642 aaPredicted RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 MAPK1P28482 360 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 HOXD3P31249 432 aaPredicted RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 FNTAP49354 379 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 SELENOVP59797 346 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 BPIFB3P59826 476 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 FGF12P61328 243 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 C2orf80Q0P641 193 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 FRG1Q14331 258 aaKnown RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 C11orf91Q3C1V1 193 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 GGTA1PQ4G0N0 100 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 CLEC6AQ6EIG7 209 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 CMC1Q7Z7K0 106 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 OR4F17Q8NGA8 305 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 OR4F6Q8NGB9 312 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 CDS1Q92903 461 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 DACT3Q96B18 629 aaPredicted RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 CHMP6Q96FZ7 201 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 APIPQ96GX9 242 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 OR4F4Q96R69 305 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 BTBD2Q9BX70 525 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 HOXD1Q9GZZ0 328 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 MIEF1Q9NQG6 463 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 B3GNT2Q9NY97 397 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 CPSF2Q9P2I0 782 aaKnown RBP7.83□□□□□ -1.16
NEDD1-211ENST00000557454 TRAPPC4Q9Y296 219 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 DTNAQ9Y4J8 743 aa7.83□□□□□ -1.16
NEDD1-211ENST00000557454 ALMS1Q8TCU4 4167 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 NPIPB9F8W1W9 429 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 SPRY3O43610 288 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 AKR7A3O95154 331 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 EFNB2P52799 333 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 ATP12AP54707 1039 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 ERVS71-1P61550 626 aa7.82□□□□□ -1.16
NEDD1-211ENST00000557454 PIGFQ07326 219 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms