RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CCKARP32238 428 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 UGT2B15P54855 530 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 BNIP1Q12981 228 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 C1DQ13901 141 aaKnown RBP12.03□□□□□ -0.48
SHMT2-228ENST00000557302 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
SHMT2-228ENST00000557302 TRAM2Q15035 370 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 P2RY6Q15077 328 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 MTX3Q5HYI7 312 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 CYP2R1Q6VVX0 501 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 STAC2Q6ZMT1 411 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 Q6ZT83 130 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 CREB3L2Q70SY1 520 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 AAED1Q7RTV5 226 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 CXorf67Q86X51 503 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-228ENST00000557302 DHFR2Q86XF0 187 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 GABRG1Q8N1C3 465 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 UBE2J2Q8N2K1 259 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 KDM8Q8N371 416 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 MCUR1Q96AQ8 359 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 CCDC124Q96CT7 223 aaKnown RBP12.03□□□□□ -0.48
SHMT2-228ENST00000557302 CLPTM1LQ96KA5 538 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 ZNF385AQ96PM9 386 aaKnown RBP12.03□□□□□ -0.48
SHMT2-228ENST00000557302 BTBD10Q9BSF8 475 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 MEPEQ9NQ76 525 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-228ENST00000557302 NANSQ9NR45 359 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 NDUFAF4Q9P032 175 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 PRSS50Q9UI38 385 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 ZNF229Q9UJW7 825 aa12.03□□□□□ -0.48
SHMT2-228ENST00000557302 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.48
SHMT2-228ENST00000557302 LOC102725191A0A1B0GVB3 256 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 hCG_2039718K7EN88 272 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 PRSS23O95084 383 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 OR6A2O95222 327 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 STAMBPO95630 424 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 ADAP00813 363 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 IGF2P01344 180 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 IGHV3-9P01782 118 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 HIST1H2ABP04908 130 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 UMPSP11172 480 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 EPXP11678 715 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 RHCEP18577 417 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 PSMB1P20618 241 aaKnown RBP12.02□□□□□ -0.49
SHMT2-228ENST00000557302 NTF4P34130 210 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 VLDLRP98155 873 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 PUDPQ08623 228 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 FBXW9Q5XUX1 488 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 LCN8Q6JVE9 175 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 TSEN54Q7Z6J9 526 aaKnown RBP12.02□□□□□ -0.49
SHMT2-228ENST00000557302 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 UEVLDQ8IX04 471 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 ZNF295-AS1Q8N0V1 137 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 PIK3C3Q8NEB9 887 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 STEAP2Q8NFT2 490 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 OR5J2Q8NH18 312 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 PFN4Q8NHR9 129 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 SLC7A6OSQ96CW6 309 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-228ENST00000557302 ASB9Q96DX5 294 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 SGTBQ96EQ0 304 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 C14orf79Q96F83 325 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 C7orf34Q96L11 122 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 DACH2Q96NX9 599 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 MED18Q9BUE0 208 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 HDHD5Q9BXW7 423 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 ANKRD19PQ9H560 264 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 NMNAT1Q9HAN9 279 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-228ENST00000557302 MAN2C1Q9NTJ4 1040 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 B3GAT1Q9P2W7 334 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 MALT1Q9UDY8 824 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 GPR52Q9Y2T5 361 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 TESMINQ9Y4I5 508 aa12.02□□□□□ -0.49
SHMT2-228ENST00000557302 DCHS2Q6V1P9 2916 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 HTR3EA5X5Y0 456 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 PLPP3O14495 311 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 AKAP8O43823 692 aaKnown RBP12.01□□□□□ -0.49
SHMT2-228ENST00000557302 ATP5HO75947 161 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 OR7A10O76100 309 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 HPRP00739 348 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 SEMG1P04279 462 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 FABP3P05413 133 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 H1F0P07305 194 aaKnown RBP12.01□□□□□ -0.49
SHMT2-228ENST00000557302 PRF1P14222 555 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 PPP3CBP16298 524 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 FUT4P22083 530 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 AHCYP23526 432 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 IL32P24001 234 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 RASSF2P50749 326 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 CLDN17P56750 224 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 MS4A2Q01362 244 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 TLE4Q04727 773 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 ITGADQ13349 1161 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 SFRP5Q5T4F7 317 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 ANKRD34AQ69YU3 496 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 SLC46A3Q7Z3Q1 461 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 NANOGNBQ7Z5D8 188 aa12.01□□□□□ -0.49
SHMT2-228ENST00000557302 ACOT11Q8WXI4 607 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms