RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF256Q9Y2P7 627 aaPredicted RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ZFP92A6NM28 416 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 M0R2Z0 102 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SULT2B1O00204 365 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM115Q12893 351 aaPredicted RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 BTNL3Q6UXE8 466 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF547Q8IVP9 402 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 OR4K13Q8NH42 304 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 L3HYPDHQ96EM0 354 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 WDR18Q9BV38 432 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ACTR3CQ9C0K3 210 aaPredicted RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 LIN28AQ9H9Z2 209 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 USP36Q9P275 1121 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SCN5AQ14524 2016 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 NPIPB15A6NHN6 443 aaPredicted RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 M0QZ24 198 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 MAN2B1O00754 1011 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SCO2O43819 266 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 UNGP13051 313 aaPredicted RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SOX3P41225 446 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 H2BFWTQ7Z2G1 175 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM163Q8TC26 289 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 DNPH1O43598 174 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 KIAA1024LP59773 190 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM107Q6UX40 140 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 NLRC3Q7RTR2 1065 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM175Q9BSA9 504 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 NMES1Q9C002 83 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 NOSIPQ9Y314 301 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 RPL11P62913 178 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 OR2A1Q8NGT9 310 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 P2RX7Q99572 595 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 MACROD1Q9BQ69 325 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 A0A1W2PQ09 198 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TCRBV5S4A2TA0A5A2 114 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 K7ERQ8 282 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 DGKEP52429 567 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 LGALS4P56470 323 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TBPL1P62380 186 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 MS4A13Q5J8X5 152 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ABHD15Q6UXT9 468 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ADGRE4PQ86SQ3 457 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 RAB8BQ92930 207 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 OR5B2Q96R09 309 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 EGLN1Q9GZT9 426 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PELI2Q9HAT8 420 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ZDHHC7Q9NXF8 308 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 RARRES3Q9UL19 164 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 CAMK2AQ9UQM7 478 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 STYXL1Q9Y6J8 313 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PEX10O60683 326 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 HSBP1O75506 76 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SERPINA2P20848 420 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SPCS3P61009 180 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 C22orf39Q6P5X5 142 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PINX1Q96BK5 328 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 WDR92Q96MX6 357 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 NRIP3Q9NQ35 241 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 DLL4Q9NR61 685 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PHRF1Q9P1Y6 1649 aaKnown RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 UNCXA6NJT0 531 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF732B4DXR9 585 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 APEHP13798 732 aaKnown RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 OPRD1P41143 372 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 WNT7BP56706 349 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 VWA1Q6PCB0 445 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 LINC00116Q8NCU8 138 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 ATP5SQ99766 215 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 SGPP1Q9BX95 441 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 GSX1Q9H4S2 264 aaPredicted RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 RANGRFQ9HD47 186 aaPredicted RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 S1PR4O95977 384 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 MOGAT2Q3SYC2 334 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF626Q68DY1 528 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 TTTY10Q9BZA0 68 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 MMP28Q9H239 520 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 INIPQ9NRY2 104 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 SYN1P17600 705 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 POLR2CP19387 275 aaPredicted RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 ELOBQ15370 118 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 EML3Q32P44 896 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 RAB6CQ9H0N0 254 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 DNMT3BQ9UBC3 853 aaKnown RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 PGAP2Q9UHJ9 254 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 BTNL2Q9UIR0 455 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 BOKQ9UMX3 212 aaPredicted RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM221A6NGB7 291 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 HSPB2A8KAH6 182 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 DEPDC5O75140 1603 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 COX5AP20674 150 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 HSPB2Q16082 182 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 OR2L13Q8N349 312 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 HEYLQ9NQ87 328 aaPredicted RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 UBQLN4Q9NRR5 601 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 CPNE6O95741 557 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 HTR5AP47898 357 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 KREMEN2Q8NCW0 462 aa8.25□□□□□ -1.09
SYNE3-205ENST00000557275 NTPCRQ9BSD7 190 aaKnown RBP8.25□□□□□ -1.09
SYNE3-205ENST00000557275 FAM155AB1AL88 458 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms