RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SLC38A2Q96QD8 506 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 KCNS3Q9BQ31 491 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 RHOXF2Q9BQY4 288 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 MECRQ9BV79 373 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 C1QTNF6Q9BXI9 259 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 ROPN1BQ9BZX4 212 aaPredicted RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 DPY30Q9C005 99 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 OR11A1Q9GZK7 315 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 PLK3Q9H4B4 646 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 ROPN1Q9HAT0 212 aaPredicted RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 CRNNQ9UBG3 495 aaPredicted RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 LGALS13Q9UHV8 139 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.54□□□□□ -1.2
VRK1-206ENST00000557222 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
VRK1-206ENST00000557222 A0A096LPI6 279 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 SHISA3A0PJX4 238 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 TMEM72A0PK05 275 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 CFAP73A6NFT4 308 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 LIPT2A6NK58 231 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 AQP7P3A6NL99 342 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 SMIM23A6NLE4 172 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 ATP6V1G2-DDX39BF2Z307 99 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 HMGN4O00479 90 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 BCAS1O75363 584 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 SKAP2O75563 359 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 DBIP07108 87 aaKnown RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 BPGMP07738 259 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 ERCC1P07992 297 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 TACSTD2P09758 323 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 TACR3P29371 465 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 ARRB2P32121 409 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 CHI3L1P36222 383 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 IDH3GP51553 393 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 SH3BGRP55822 239 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 SLC25A3Q00325 362 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 POU3F1Q03052 451 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 FUT5Q11128 374 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 EPS8Q12929 822 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 GPAT3Q53EU6 434 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 OTUD3Q5T2D3 398 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 TNFAIP8L2Q6P589 184 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 ANKRD16Q6P6B7 361 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 ZCCHC23Q6ZST2 131 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 AAED1Q7RTV5 226 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 TRIML2Q8N7C3 387 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 ARIH2OSQ8N7S6 290 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 OR9K2Q8NGE7 335 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 AGR3Q8TD06 166 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 TCP10LQ8TDR4 215 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 NEU4Q8WWR8 484 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 CNOT9Q92600 299 aaKnown RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 BCL2L2Q92843 193 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 RAB8BQ92930 207 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 CCDC115Q96NT0 180 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 FOXN4Q96NZ1 517 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 SORCS2Q96PQ0 1159 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 LINC00470Q9BZP3 86 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 SLC38A1Q9H2H9 487 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 ZNF442Q9H7R0 627 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 CA10Q9NS85 328 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 SLC17A7Q9P2U7 560 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 MARCOQ9UEW3 520 aaPredicted RBP7.53□□□□□ -1.2
VRK1-206ENST00000557222 BTNL2Q9UIR0 455 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 MOKQ9UQ07 419 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 MGAM2Q2M2H8 2515 aa7.53□□□□□ -1.2
VRK1-206ENST00000557222 A0A0A6YYJ9 748 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 IGHV1-18A0A0C4DH31 117 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 IGHV4-61A0A0C4DH41 118 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 TLDC2A0PJX2 215 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 A8MVM7 634 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 ZNF587BE7ETH6 402 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 SLCO1B7G3V0H7 640 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 RPL36A-HNRNPH2H7BZ11 118 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 KRT33AO76009 404 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 UBOX5O94941 541 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 STAMBPO95630 424 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 CPSF4O95639 269 aaKnown RBP7.52□□□□□ -1.21
VRK1-206ENST00000557222 TGFAP01135 160 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 IGLV1-44P01699 117 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 MYZAPP0CAP1 466 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 IL7RP16871 459 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 PCMT1P22061 227 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 CXCR1P25024 350 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 ETV4P43268 484 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 CHN2P52757 468 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
VRK1-206ENST00000557222 TBRG1Q3YBR2 411 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 IQCCQ4KMZ1 466 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 C9orf135Q5VTT2 229 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 TMEM225Q6GV28 225 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 OLIG3Q7RTU3 272 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 SLC46A3Q7Z3Q1 461 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 CCDC36Q8IYA8 594 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 CLEC4FQ8N1N0 589 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 IL17RDQ8NFM7 739 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms