RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 EPS8Q12929 822 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 SYPL1Q16563 259 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 SMU1Q2TAY7 513 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 EPHX4Q8IUS5 362 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 ALKBH3Q96Q83 286 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-223ENST00000556689 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 SLC38A1Q9H2H9 487 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 HIF1ANQ9NWT6 349 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 ASIC5Q9NY37 505 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 RASD1Q9Y272 281 aa10.94□□□□□ -0.66
SHMT2-223ENST00000556689 A8MVM7 634 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 BIRC5O15392 142 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 KCNAB3O43448 404 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 CELA3BP08861 270 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ARRB2P32121 409 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ARR3P36575 388 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ARF1P84077 181 aaKnown RBP10.93□□□□□ -0.66
SHMT2-223ENST00000556689 BNIP2Q12982 314 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 DAG1Q14118 895 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 MRPL2Q5T653 305 aaKnown RBP10.93□□□□□ -0.66
SHMT2-223ENST00000556689 PRAMEF8Q5VWM4 474 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 PRAMEF7Q5VXH5 474 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 LRRC74BQ6ZQY2 392 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 NUDCD3Q8IVD9 361 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ZNF440Q8IYI8 595 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 CDK20Q8IZL9 346 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 KIRREL3Q8IZU9 778 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ANKFN1Q8N957 763 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 LRRC8CQ8TDW0 803 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 FAM216AQ8WUB2 273 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 TMEM186Q96B77 213 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 SLC35A5Q9BS91 424 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 NELFAQ9H3P2 528 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 TPK1Q9H3S4 243 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 SLC17A7Q9P2U7 560 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 PCDHB10Q9UN67 800 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 GRIP1Q9Y3R0 1128 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 CMAHPQ9Y471 501 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 SPEF1Q9Y4P9 236 aa10.93□□□□□ -0.66
SHMT2-223ENST00000556689 IGHV2OR16-5A0A0B4J2B6 119 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 FAM157AC9JC47 383 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 RPL36A-HNRNPH2H7BZ11 118 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 TRIM77I1YAP6 450 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 SYNGR3O43761 229 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 DBIP07108 87 aaKnown RBP10.92□□□□□ -0.66
SHMT2-223ENST00000556689 CHRM4P08173 479 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 TFPTP0C1Z6 253 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 GPR6P46095 362 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-223ENST00000556689 EVX1P49640 407 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 COPZ1P61923 177 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 POU3F1Q03052 451 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-223ENST00000556689 SLC9B1Q4ZJI4 515 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 WBP2NLQ6ICG8 309 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 SHQ1Q6PI26 577 aaKnown RBP10.92□□□□□ -0.66
SHMT2-223ENST00000556689 USP43Q70EL4 1123 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 PEG10Q86TG7 708 aaKnown RBP10.92□□□□□ -0.66
SHMT2-223ENST00000556689 MYPOPQ86VE0 399 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-223ENST00000556689 RNF130Q86XS8 419 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 CCDC36Q8IYA8 594 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 PEX5LQ8IYB4 626 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 CADM2Q8N3J6 435 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 LRRC37BQ96QE4 947 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 MS4A5Q9H3V2 200 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 AKTIPQ9H8T0 292 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 LPAR2Q9HBW0 351 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 CRLF2Q9HC73 371 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 RLIMQ9NVW2 624 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 REV1Q9UBZ9 1251 aa10.92□□□□□ -0.66
SHMT2-223ENST00000556689 POLR3GO15318 223 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 SLC43A1O75387 559 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 RGS9O75916 674 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 C1QCP02747 245 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 TFP02787 698 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 MSMBP08118 114 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 GKN3PP0CG01 181 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 NR2F1P10589 423 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 CREB1P16220 341 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 ZNF43P17038 809 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 RPS4Y1P22090 263 aaKnown RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 NR4A1P22736 598 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 COL8A2P25067 703 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 ACAA2P42765 397 aaKnown RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 ANXA11P50995 505 aaKnown RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 CLDN17P56750 224 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 TMEM33P57088 247 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 TXNL4AP83876 142 aaKnown RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 NPRL3Q12980 569 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 SNTB2Q13425 540 aaKnown RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 ELFN2Q5R3F8 820 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 C1orf140Q5VVS0 124 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 KRT80Q6KB66 452 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 FAHD2BQ6P2I3 314 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-223ENST00000556689 KDM8Q8N371 416 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 CLDND2Q8NHS1 167 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 RDH5Q92781 318 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 TESCQ96BS2 214 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 FAHD2AQ96GK7 314 aa10.91□□□□□ -0.66
SHMT2-223ENST00000556689 PPP1R36Q96LQ0 422 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms