RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FADS1O60427 444 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 CPNE3O75131 537 aaKnown RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SCRG1O75711 98 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 GLCEO94923 617 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 APOA1P02647 267 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 EIF4EP06730 217 aaKnown RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 TDGF1P13385 188 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 ELK1P19419 428 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 F8A1P23610 371 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 EDNRAP25101 427 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 CASP3P42574 277 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 MAGEB1P43366 347 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SLC6A8P48029 635 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 EVX1P49640 407 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 TPTEP56180 551 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 FBXW4P57775 412 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 TAS2R43P59537 309 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 RPS11P62280 158 aaKnown RBP eCLIP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 RNF4P78317 190 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 LGALS3BPQ08380 585 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 KRR1Q13601 381 aaKnown RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 QPRTQ15274 297 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 ISXQ2M1V0 245 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 NKAIN1Q4KMZ8 207 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 YOD1Q5VVQ6 348 aaPredicted RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PRR23CQ6ZRP0 262 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 GLCCI1Q86VQ1 547 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 EID2Q8N6I1 236 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 NFAM1Q8NET5 270 aaPredicted RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SNX33Q8WV41 574 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 OIT3Q8WWZ8 545 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 CCNL2Q96S94 520 aaPredicted RBP9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PDCD1LG2Q9BQ51 273 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 MMP28Q9H239 520 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 PPP1R3EQ9H7J1 279 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 SRPK3Q9UPE1 567 aa9.19□□□□□ -0.94
TMEM260-211ENST00000556648 A0A1W2PPC1 479 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 FAM25AB3EWG3 89 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 FAM25CB3EWG5 89 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 FAM25GB3EWG6 89 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PATE3B3GLJ2 98 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PLA2G10O15496 165 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SUSD5O60279 629 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PAHP00439 452 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PLGP00747 810 aaPredicted RBP9.18□□□□□ -0.94
TMEM260-211ENST00000556648 IGF2P01344 180 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 HEXBP07686 556 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 IL11P20809 199 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SDHAP31040 664 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PI4KAP42356 2102 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 RPS27P42677 84 aaKnown RBP9.18□□□□□ -0.94
TMEM260-211ENST00000556648 GBX2P52951 348 aaPredicted RBP9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SLC25A1P53007 311 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PNLIPRP2P54317 469 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 ACTA2P62736 377 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 ACTG2P63267 376 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 ASAH1Q13510 395 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 IL18Q14116 193 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SLC35D3Q5M8T2 416 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 HBMQ6B0K9 141 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 RABEPKQ7Z6M1 372 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 UBALD2Q8IYN6 164 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SYS1Q8N2H4 156 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 GDPD1Q8N9F7 314 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 GALNT6Q8NCL4 622 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 APCDD1LQ8NCL9 501 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SETD6Q8TBK2 473 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 GPR119Q8TDV5 335 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 HSD17B8Q92506 261 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 C8orf44Q96CB5 159 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SLC25A36Q96CQ1 311 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SMIM19Q96E16 107 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 TXNDC15Q96J42 360 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 FOXN4Q96NZ1 517 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 CTRCQ99895 268 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 OR11A1Q9GZK7 315 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 TGIF2Q9GZN2 237 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 AKIRIN1Q9H9L7 192 aaPredicted RBP9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SRA1Q9HD15 236 aaKnown RBP9.18□□□□□ -0.94
TMEM260-211ENST00000556648 TAS2R5Q9NYW4 299 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 RASD1Q9Y272 281 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 SLC6A5Q9Y345 797 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 PCDHGB2Q9Y5G2 931 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 CACNA1EQ15878 2313 aa9.18□□□□□ -0.94
TMEM260-211ENST00000556648 IGLV3-12A0A075B6K2 115 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TMED7-TICAM2A0A0A6YYA0 188 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR6C76A6NM76 312 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 IDH3BO43837 385 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 EIF4E2O60573 245 aaKnown RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TXNDC12O95881 172 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 CFIP05156 583 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ANKRD34CP0C6C1 535 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR8G3PP0DMU2 310 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 GP1BBP13224 206 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 CD53P19397 219 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 MYL9P24844 172 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 CXCR1P25024 350 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 LCN1P31025 176 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 NANOS3P60323 173 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms