RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PNLIPRP3Q17RR3 467 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 RFX4Q33E94 735 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 PDLIM3Q53GG5 364 aaPredicted RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 SFT2D3Q587I9 215 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 KHDRBS2Q5VWX1 349 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 CARD17Q5XLA6 110 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 LPCAT4Q643R3 524 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 OR4F3Q6IEY1 312 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 OR7E24Q6IFN5 339 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 FAM71E1Q6IPT2 247 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 PRR27Q6MZM9 219 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 FIGLAQ6QHK4 219 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 GCNT7Q6ZNI0 430 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ZNF621Q6ZSS3 439 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 COMMD6Q7Z4G1 85 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 PIP4P1Q86T03 277 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 CALHM3Q86XJ0 350 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 CACUL1Q86Y37 369 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 LAX1Q8IWV1 398 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ADHFE1Q8IWW8 467 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 SLC35F3Q8IY50 421 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 MARVELD2Q8N4S9 558 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 COMMD1Q8N668 190 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ZNF611Q8N823 705 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 NRACQ8N912 160 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 OR4K1Q8NGD4 311 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 OR10A6Q8NH74 314 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 CLHC1Q8NHS4 586 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 RPLP0P6Q8NHW5 317 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 C16orf78Q8WTQ4 265 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 OR1E3Q8WZA6 343 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 AKAP1Q92667 903 aaKnown RBP eCLIP4.64□□□□□ -1.67
SRP54-211ENST00000556445 PPCDCQ96CD2 204 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ORAI1Q96D31 301 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ZNF597Q96LX8 424 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 RDH12Q96NR8 316 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 RASL10BQ96S79 203 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 FAIM2Q9BWQ8 316 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 MS4A8Q9BY19 250 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 YTHDF1Q9BYJ9 559 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 UBE2ZQ9H832 354 aaPredicted RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 MRPS30Q9NP92 439 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 MMP25Q9NPA2 562 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 MIEF1Q9NQG6 463 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 YAE1D1Q9NRH1 226 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 DCAF13Q9NV06 445 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 IMP3Q9NV31 184 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 THUMPD1Q9NXG2 353 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 WNT16Q9UBV4 365 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 PEF1Q9UBV8 284 aaKnown RBP4.64□□□□□ -1.67
SRP54-211ENST00000556445 SLC23A2Q9UGH3 650 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 OR1A2Q9Y585 309 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 DNAH12Q6ZR08 3092 aa4.64□□□□□ -1.67
SRP54-211ENST00000556445 ATG2BQ96BY7 2078 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 A0A087X0K7 114 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 LY6G6EA0A0G2JKS1 128 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 KIR2DS5A0A0G2JLQ3 304 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 A0A0G2JNG1 304 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 FAM240BA0A1B0GVZ2 78 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 A0A1W2PPW3 197 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 A0A1W2PRB8 838 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 BTBD17A6NE02 478 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ANKUB1A6NFN9 424 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 TMEM221A6NGB7 291 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 FAM157AC9JC47 383 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 KIR2DS3K7RE56 304 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 GNGT2O14610 69 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RRHO14718 337 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 CLOCKO15516 846 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ZNF208O43345 1280 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 KCNAB3O43448 404 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR1F1O43749 312 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 DPM1O60762 260 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 PRAF2O60831 178 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SCN2BO60939 215 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ATP6V1G1O75348 118 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SAP30O75446 220 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 LRATO95237 230 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 CPSF4O95639 269 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 HPRP00739 348 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 CSN3P07498 182 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RFPL3SP0C7P2 107 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 PRF1P14222 555 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ZNF26P17031 533 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 GABRG2P18507 467 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 PAICSP22234 425 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 UQCRC2P22695 453 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 MAT2AP31153 395 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 CDX1P47902 265 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 CEBPDP49716 269 aaPredicted RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 MAPK12P53778 367 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 MTCP1P56278 107 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 OR4D2P58180 307 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RPS15AP62244 130 aaKnown RBP4.63□□□□□ -1.67
SRP54-211ENST00000556445 SORDQ00796 357 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 RELAQ04206 551 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 ZNF91Q05481 1191 aa4.63□□□□□ -1.67
SRP54-211ENST00000556445 SRSF1Q07955 248 aaKnown RBP eCLIP4.63□□□□□ -1.67
SRP54-211ENST00000556445 RGS1Q08116 209 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms