RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MTRF1O75570 445 aaKnown RBP13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 S100A2P29034 98 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 SEC61A1P61619 476 aaKnown RBP13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 GLO1Q04760 184 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 DYRK1AQ13627 763 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 CLVS2Q5SYC1 327 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 TMEM225Q6GV28 225 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 STEAP1BQ6NZ63 245 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 TTLL10Q6ZVT0 673 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 ACBD4Q8NC06 268 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF416Q9BWM5 594 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 IL23AQ9NPF7 189 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 KCNE3Q9Y6H6 103 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 AGPAT2O15120 278 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 TPMTP51580 245 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 ERVFC1P60507 584 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 AANATQ16613 207 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 FAAP20Q6NZ36 180 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC35D2Q76EJ3 337 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 SVBPQ8N300 66 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR5T3Q8NGG3 340 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 PMM1Q92871 262 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 VRK1Q99986 396 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC38A1Q9H2H9 487 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 CLDND1Q9NY35 253 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 REV1Q9UBZ9 1251 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 MOKQ9UQ07 419 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 FFAR1O14842 300 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 APBB3O95704 486 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 THBS1P07996 1170 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 CRABP1P29762 137 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 KRBOX4Q5JUW0 171 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 SPIN3Q5JUX0 258 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 CARD17Q5XLA6 110 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 GKN2Q86XP6 184 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR4K17Q8NGC6 315 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 THAP3Q8WTV1 239 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 ST8SIA4Q92187 359 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 HDAC8Q9BY41 377 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 MPIG6BO95866 241 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 MAOAP21397 527 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 GPR139Q6DWJ6 353 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF585AQ6P3V2 769 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 NDUFAF7Q7L592 441 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 CDC6Q99741 560 aa13.87□□□□□ -0.19
ARHGEF40-207ENST00000556399 AGAP14A8MT82 685 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 H7C417 338 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 FADS1O60427 444 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 NR2C1P13056 603 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 M6PRP20645 277 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 HNRNPA2B1P22626 353 aaKnown RBP13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 TAS2R31P59538 309 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 AGERQ15109 404 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR5T2Q8NGG2 359 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 STEAP1Q9UHE8 339 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 TCRBV21S2A2A0A5A6 115 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 C1orf196B1AJZ1 125 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 RBMXL2O75526 392 aaKnown RBP13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 SCGNO76038 276 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 CDK2P24941 298 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 GLP1RP43220 463 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 SLC6A8P48029 635 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 ERV3-1Q14264 604 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 DUSP18Q8NEJ0 188 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZFPM2Q8WW38 1151 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 MAFIPQ8WZ33 124 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 MBNL1Q9NR56 388 aaKnown RBP13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 NPIPB8E9PQR5 432 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 HIST1H1CP16403 213 aaKnown RBP13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 DUSP8Q13202 625 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 SERTAD2Q14140 314 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 RHEBQ15382 184 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 BCL2A1Q16548 175 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 MFSD8Q8NHS3 518 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 SMIM19Q96E16 107 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 ADOQ96SZ5 270 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 IL20Q9NYY1 176 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 PRICKLE3O43900 615 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 IFNGR1P15260 489 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 RGS19P49795 217 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 TMEM151BQ8IW70 566 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 IL17RCQ8NAC3 791 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 OR51S1Q8NGJ8 323 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 SPHK1Q9NYA1 384 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 CA5BQ9Y2D0 317 aa13.86□□□□□ -0.19
ARHGEF40-207ENST00000556399 NINQ8N4C6 2090 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 KNG1P01042 644 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 CLUP10909 449 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 NR0B1P51843 470 aaKnown RBP13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 HERV-K104P61576 105 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 FGL2Q14314 439 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 ZNF77Q15935 545 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 SGCAQ16586 387 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 FGF13Q92913 245 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 GCDHQ92947 438 aaPredicted RBP13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 DUSP22Q9NRW4 184 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 SERTAD3Q9UJW9 196 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 SERINC4A6NH21 518 aa13.85□□□□□ -0.19
ARHGEF40-207ENST00000556399 GLCEO94923 617 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms