RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 TEX13CA0A0J9YWL9 993 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 DAPL1A0PJW8 107 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF208O43345 1280 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 CD79BP40259 229 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 DIO1P49895 249 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 ENTPD1P49961 510 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 SLC25A1P53007 311 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 ACTC1P68032 377 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 ACTA1P68133 377 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 DCTN2Q13561 401 aaKnown RBP13.31□□□□□ -0.28
VPS33B-205ENST00000556096 PON3Q15166 354 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 SGCBQ16585 318 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 BICRALQ6AI39 1079 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 TMPRSS7Q7RTY8 843 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 PPP1R32Q7Z5V6 425 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 TMPRSS12Q86WS5 348 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 POMGNT2Q8NAT1 580 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 OR5J2Q8NH18 312 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 Q96M85 177 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 FRMD6Q96NE9 622 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 NMNAT3Q96T66 252 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 ASPNQ9BXN1 380 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 SIAEQ9HAT2 523 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 PLGRKTQ9HBL7 147 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF160Q9HCG1 818 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 TAS2R5Q9NYW4 299 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
VPS33B-205ENST00000556096 SSR3Q9UNL2 185 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 SF3B6Q9Y3B4 125 aaKnown RBP13.31□□□□□ -0.28
VPS33B-205ENST00000556096 CHCHD2Q9Y6H1 151 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-205ENST00000556096 PMF1-BGLAPU3KQ54 211 aa13.31□□□□□ -0.28
VPS33B-205ENST00000556096 OR6C68A6NDL8 312 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 DXOO77932 396 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 AHSA1O95433 338 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 GYPBP06028 91 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 CDKN2AP42771 156 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 CAPZA2P47755 286 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MLF1P58340 268 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 RPS3AP61247 264 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 RPS15P62841 145 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 SOWAHCQ53LP3 525 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 JAZF1Q86VZ6 243 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 RPS19BP1Q86WX3 136 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ESX1Q8N693 406 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 SPRYD4Q8WW59 207 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 SMPDL3BQ92485 455 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 RASD2Q96D21 266 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MRGPRX4Q96LA9 322 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 TIMP4Q99727 224 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ALG8Q9BVK2 526 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 FAM117AQ9C073 453 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 PCDHGB7Q9Y5F8 929 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 PCNX3Q9H6A9 2034 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MPDZO75970 2070 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MED19A0JLT2 244 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 HPP00738 406 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 F13BP05160 661 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 SPI1P17947 270 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 GABRA5P31644 462 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 SSR4P51571 173 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 BMXP51813 675 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF41P51814 821 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 CHAF1BQ13112 559 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 GPR50Q13585 617 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MFSD13AQ14CX5 517 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF829Q3KNS6 432 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 LEG1Q6P5S2 330 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ARSKQ6UWY0 536 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 LSM14AQ8ND56 463 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 OR2M3Q8NG83 312 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ASB15Q8WXK1 588 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 NTNG2Q96CW9 530 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 POTEKPQ9BYX7 375 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 NXF2Q9GZY0 626 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MMP27Q9H306 513 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 CDCP1Q9H5V8 836 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 RNF167Q9H6Y7 350 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 ASB6Q9NWX5 421 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 BABAM2Q9NXR7 383 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
VPS33B-205ENST00000556096 GRHPRQ9UBQ7 328 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 MOKQ9UQ07 419 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
VPS33B-205ENST00000556096 AKAP13Q12802 2813 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 ASPMQ8IZT6 3477 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 FTCDNL1E5RQL4 147 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 GLCEO94923 617 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 LALBAP00709 142 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 OR2T7P0C7T2 308 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 RPS18P62269 152 aaKnown RBP13.29□□□□□ -0.28
VPS33B-205ENST00000556096 PLPPR5Q32ZL2 321 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 CD200R1LQ6Q8B3 271 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 IL20RBQ6UXL0 311 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 CROCCP3Q8IVE0 287 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms