RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 NUP37Q8NFH4 326 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 PNPT1Q8TCS8 783 aaKnown RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM158Q8WZ71 300 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 TLCD1Q96CP7 247 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 C7orf26Q96N11 449 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 KCNS3Q9BQ31 491 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 CCDC28BQ9BUN5 200 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 C1QTNF6Q9BXI9 259 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 PAIP1Q9H074 479 aaKnown RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 DENND2DQ9H6A0 471 aaPredicted RBP6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF442Q9H7R0 627 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 TMBIM4Q9HC24 238 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 CA10Q9NS85 328 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC6A13Q9NSD5 602 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 CORINQ9Y5Q5 1042 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 FKBP7Q9Y680 259 aa6.79□□□□□ -1.32
PTCSC3-201ENST00000556013 ARFGEF3Q5TH69 2177 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 IGHV1-18A0A0C4DH31 117 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 A0A1W2PR80 420 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 PRORSD1PA6NEY8 169 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 C5orf58C9J3I9 102 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 GPRIN2O60269 458 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 LMX1BO60663 402 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC43A1O75387 559 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 ARAFP10398 606 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 HOXB9P17482 250 aaPredicted RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 GPX2P18283 190 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 GTF2E2P29084 291 aaKnown RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 ARR3P36575 388 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 EVX1P49640 407 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SELENOPP49908 381 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 MAGOHP61326 146 aaKnown RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SNRPD2P62316 118 aaKnown RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC25A3Q00325 362 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 NAAAQ02083 359 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 BNIP2Q12982 314 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 C6orf10Q5SRN2 563 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 C9orf135Q5VTT2 229 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 REEP3Q6NUK4 255 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 NIPAL3Q6P499 406 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 DHRS4L2Q6PKH6 230 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 BLOC1S3Q6QNY0 202 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 H1FNTQ75WM6 255 aaPredicted RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF627Q7L945 461 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 HMGN2P46Q86SG4 172 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SERPINA11Q86U17 422 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SNX32Q86XE0 403 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 KRT73Q86Y46 540 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF525Q8N782 197 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 GOLGA6L1Q8N7Z2 621 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SCAIQ8N9R8 606 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 PIK3C3Q8NEB9 887 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 NEU4Q8WWR8 484 aaPredicted RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 STON2Q8WXE9 905 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC38A4Q969I6 547 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 DNAJA3Q96EY1 480 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC47A1Q96FL8 570 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC41A3Q96GZ6 507 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 ANKRD27Q96NW4 1050 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 OR52B2Q96RD2 323 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 KCNK17Q96T54 332 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 EPYCQ99645 322 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 PTDSS2Q9BVG9 487 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 RAB1BQ9H0U4 201 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 PLK3Q9H4B4 646 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM38AQ9H6F2 299 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 ADPRHL2Q9NX46 363 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 RPS6KB2Q9UBS0 482 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 CORO2BQ9UQ03 480 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 MOKQ9UQ07 419 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 USH1CQ9Y6N9 552 aa6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 V9GYY5 206 aaPredicted RBP6.78□□□□□ -1.32
PTCSC3-201ENST00000556013 CR1P17927 2039 aa6.77□□□□□ -1.32
PTCSC3-201ENST00000556013 YLPM1P49750 1951 aaKnown RBP6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 TRAV36DV7A0A075B6V5 113 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 A0A087WUJ7 227 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 ZNF99A8MXY4 864 aaPredicted RBP6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 EVPLLA8MZ36 301 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 ATP6V1G2-DDX39BF2Z307 99 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 POLR3GO15318 223 aaPredicted RBP6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 MGRN1O60291 552 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 FMO6PO60774 539 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 UPK3AO75631 287 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 SERPINB7O75635 380 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 LGI1O95970 557 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 C8BP07358 591 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 ERCC1P07992 297 aaPredicted RBP6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 PRG2P13727 222 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 PTNP21246 168 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 NR4A2P43354 598 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 PPOXP50336 477 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 ATP4BP51164 291 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 IDH3GP51553 393 aaPredicted RBP6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 CLDN17P56750 224 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 STX1BP61266 288 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 CDK6Q00534 326 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 SPOCK1Q08629 439 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 RBBP4Q09028 425 aa6.77□□□□□ -1.33
PTCSC3-201ENST00000556013 GTDC1Q4AE62 458 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms