RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 AKR7A3O95154 331 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 SNAP29O95721 258 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 HMGN1P05114 100 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 EDN3P14138 238 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF26P17031 533 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF43P17038 809 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 CLDN18P56856 261 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 CLDN20P56880 219 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 RPL18Q07020 188 aaKnown RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 KEAP1Q14145 624 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 LY6DQ14210 128 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF239Q16600 458 aaKnown RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 ZIK1Q3SY52 487 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 CLEC12AQ5QGZ9 265 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 GPR139Q6DWJ6 353 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 GFRALQ6UXV0 394 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 DPY19L2P2Q6ZN68 376 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 MEX3DQ86XN8 651 aaKnown RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 SIAH3Q8IW03 269 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 C8orf59Q8N0T1 100 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 LSM14AQ8ND56 463 aaKnown RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 FAM81AQ8TBF8 368 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 RELTQ969Z4 430 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 TIMP4Q99727 224 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 NPAS1Q99742 590 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 TSSK6Q9BXA6 273 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 PRDM14Q9GZV8 571 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 EGLN3Q9H6Z9 239 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 IL20Q9NYY1 176 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 TMEFF2Q9UIK5 374 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF175Q9Y473 711 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 A0A0J9YW62 118 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 A6NIZ1 184 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 AHRRA9YTQ3 701 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 FTCDNL1E5RQL4 147 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 PLPP3O14495 311 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 GPR171O14626 319 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 TPOP07202 933 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 IMPDH2P12268 514 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 APEHP13798 732 aaKnown RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 UQCRC1P31930 480 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 GRK5P34947 590 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 STARP49675 285 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 RAP1BP61224 184 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 RAP1AP62834 184 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 FOXK1P85037 733 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 POU3F1Q03052 451 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 NFATC3Q12968 1075 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 TOP3AQ13472 1001 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 PON3Q15166 354 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 PGGHGQ32M88 737 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 EMC4Q5J8M3 183 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 OR2A2Q6IF42 318 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 FCRLAQ7L513 359 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 PXKQ7Z7A4 578 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 ADCK1Q86TW2 530 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 LRRC17Q8N6Y2 441 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 Q8NA96 180 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF524Q96C55 264 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 SAMD8Q96LT4 415 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 OXGR1Q96P68 337 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 GPX7Q96SL4 187 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 SLC29A1Q99808 456 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 KATNB1Q9BVA0 655 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 SF3B5Q9BWJ5 86 aaKnown RBP10.04□□□□□ -0.8
SHMT2-220ENST00000555634 SLC25A19Q9HC21 320 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 MCCC2Q9HCC0 563 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 SPRR3Q9UBC9 169 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 KLHL21Q9UJP4 597 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 CELSR3Q9NYQ7 3312 aa10.04□□□□□ -0.8
SHMT2-220ENST00000555634 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 NPIPB13A6NJU9 1138 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 EIF4E1BA6NMX2 242 aaKnown RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF726A6NNF4 738 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 CLCA1A8K7I4 914 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 NPIPB4C9JG80 1138 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 LRRN3E7EW58 273 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ATXN7O15265 892 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 MITFO75030 526 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 PPP1R3DO95685 299 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 RENP00797 406 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 CD14P08571 375 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ACADSP16219 412 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 FUT4P22083 530 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 SHC1P29353 583 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 SDHAP31040 664 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 AQP2P41181 271 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 CTXN1P60606 82 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 HSF1Q00613 529 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 MYBPC1Q00872 1141 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 IL5RAQ01344 420 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 ITGADQ13349 1161 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 MED21Q13503 144 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 KRR1Q13601 381 aaKnown RBP10.03□□□□□ -0.8
SHMT2-220ENST00000555634 GINS1Q14691 196 aa10.03□□□□□ -0.8
SHMT2-220ENST00000555634 PTGES3Q15185 160 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms