RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TTC33Q6PID6 262 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-215ENST00000555616 IZUMO2Q6UXV1 221 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 MBOAT2Q6ZWT7 520 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 LUZP2Q86TE4 346 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 ATG4DQ86TL0 474 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-215ENST00000555616 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM200AQ86VY9 491 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 RNF113BQ8IZP6 322 aaKnown RBP8.6□□□□□ -1.03
ACTN1-215ENST00000555616 CBR4Q8N4T8 237 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 PACRGLQ8N7B6 248 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 CNEP1R1Q8N9A8 125 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 OR10G2Q8NGC3 310 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 OR4C15Q8NGM1 316 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 OR2V1Q8NHB1 315 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 PIGXQ8TBF5 258 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM239Q8WW34 195 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 ZNF524Q96C55 264 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 STARD4Q96DR4 205 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 KLHL15Q96M94 604 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 RBM4BQ9BQ04 359 aaKnown RBP8.6□□□□□ -1.03
ACTN1-215ENST00000555616 RBM4Q9BWF3 364 aaKnown RBP8.6□□□□□ -1.03
ACTN1-215ENST00000555616 SLC19A3Q9BZV2 496 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 ADAM19Q9H013 955 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 GABARAPL1Q9H0R8 117 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM185BQ9H7F4 350 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 ZNF556Q9HAH1 456 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 SERINC1Q9NRX5 453 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 MAN2C1Q9NTJ4 1040 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM5Q9Y2B1 443 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 MED31Q9Y3C7 131 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 ORC6Q9Y5N6 252 aa8.6□□□□□ -1.03
ACTN1-215ENST00000555616 A0A087WUJ7 227 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 TMED7-TICAM2A0A0A6YYA0 188 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 A0A0J9YW62 118 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 GJE1A6NN92 205 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 H0YJX3 145 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 TNFSF11O14788 317 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 EFNA2O43921 213 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 CXCL13O43927 109 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 GOSR1O95249 250 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 LYPD3O95274 346 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 HPRP00739 348 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 CGAP01215 116 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 THY1P04216 161 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 CD8BP10966 210 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 ANXA8P13928 327 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 ACADSP16219 412 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 FKBP2P26885 142 aaKnown RBP8.59□□□□□ -1.03
ACTN1-215ENST00000555616 SHC1P29353 583 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 HSPA13P48723 471 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 UGT2B15P54855 530 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 SIRPAP78324 504 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 SELENBP1Q13228 472 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 DAZAP2Q15038 168 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-215ENST00000555616 TAF11Q15544 211 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 SGCBQ16585 318 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 HBMQ6B0K9 141 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 C5orf46Q6UWT4 87 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 FAM214BQ7L5A3 538 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 NKAIN4Q8IVV8 208 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 CDK20Q8IZL9 346 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 ATG16L2Q8NAA4 619 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 OR4K5Q8NGD3 323 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 SLC25A43Q8WUT9 341 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM255BQ8WV15 326 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 GMPPAQ96IJ6 420 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-215ENST00000555616 PSD2Q9BQI7 771 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 PRSS27Q9BQR3 290 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 FUZQ9BT04 418 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM43Q9BTV4 400 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 ZNF426Q9BUY5 554 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 RASSF1Q9NS23 344 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 CHRNA9Q9UGM1 479 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 ENOPH1Q9UHY7 261 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 OSGIN1Q9UJX0 560 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 MCTS1Q9ULC4 181 aaKnown RBP8.59□□□□□ -1.03
ACTN1-215ENST00000555616 MGAT4BQ9UQ53 548 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 TMED7Q9Y3B3 224 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 CELSR1Q9NYQ6 3014 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 SPG11Q96JI7 2443 aa8.59□□□□□ -1.03
ACTN1-215ENST00000555616 A0A087WUU8 490 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 A8MVM7 634 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 PDLIM1O00151 329 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 EI24O14681 340 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF208O43345 1280 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
ACTN1-215ENST00000555616 SYNGR4O95473 234 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 ADAP00813 363 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 EPXP11678 715 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 CDH2P19022 906 aaPredicted RBP8.58□□□□□ -1.04
ACTN1-215ENST00000555616 CCKARP32238 428 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 SFTPDP35247 375 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 ALDH3A2P51648 485 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 RAD23AP54725 363 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 RIPPLY3P57055 190 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 DAG1Q14118 895 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 LAPTM4AQ15012 233 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 SEC23BQ15437 767 aa8.58□□□□□ -1.04
ACTN1-215ENST00000555616 ZNF239Q16600 458 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms