RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 IGSF9BQ9UPX0 1349 aa1.9□□□□□ -2.11
SCFD1-216ENST00000555550 C12orf77C9JDV5 145 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 LOC110117498-PIK3R3F6TDL0 507 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 ZSCAN12O43309 604 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 PFKFB2O60825 505 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 VAMP5O95183 116 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 ALDOBP05062 364 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 CALCBP10092 127 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 RNASE2P10153 161 aaKnown RBP1.89□□□□□ -2.11
SCFD1-216ENST00000555550 NPR2P20594 1047 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 IL10P22301 178 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 RPS14P62263 151 aaKnown RBP1.89□□□□□ -2.11
SCFD1-216ENST00000555550 ASPHQ12797 758 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 PRSS8Q16651 343 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 GUCA2BQ16661 112 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 COX19Q49B96 90 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 KRTAP13-2Q52LG2 175 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 OR2G6Q5TZ20 316 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 FBXW9Q5XUX1 488 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 OR52E8Q6IFG1 317 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 AFTPHQ6ULP2 937 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 SHISA6Q6ZSJ9 500 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 NLRP9Q7RTR0 991 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 CENPLQ8N0S6 344 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-216ENST00000555550 OR2L13Q8N349 312 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 OR2G3Q8NGZ4 309 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 OR5W2Q8NH69 310 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 ACTRT1Q8TDG2 376 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 TM4SF19Q96DZ7 209 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 OR10C1Q96KK4 312 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 ULBP2Q9BZM5 246 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 KRT23Q9C075 422 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 HSD3B7Q9H2F3 369 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 NOX3Q9HBY0 568 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 IL36GQ9NZH8 169 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 HOOK1Q9UJC3 728 aaKnown RBP1.89□□□□□ -2.11
SCFD1-216ENST00000555550 RASD1Q9Y272 281 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 WIF1Q9Y5W5 379 aa1.89□□□□□ -2.11
SCFD1-216ENST00000555550 CARMIL3Q8ND23 1372 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 H3BNH8 94 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 XKRYO14609 159 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 NEBLO76041 1014 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 TM7SF2O76062 418 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 TLX1NBP0CAT3 122 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 UBTFL1P0CB47 393 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-216ENST00000555550 GAP43P17677 238 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 CELP19835 753 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 TCN2P20062 427 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 NT5EP21589 574 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 CACNG7P62955 275 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 SLC15A2Q16348 729 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 SGCAQ16586 387 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 ZBED5Q49AG3 693 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 GGTA1PQ4G0N0 100 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 TMEM41BQ5BJD5 291 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 PRR9Q5T870 116 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 LYPD2Q6UXB3 125 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 PGAP1Q75T13 922 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 ZNF546Q86UE3 836 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 LRP11Q86VZ4 500 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 THOC6Q86W42 341 aaKnown RBP1.88□□□□□ -2.11
SCFD1-216ENST00000555550 SLC35F2Q8IXU6 374 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 UBALD2Q8IYN6 164 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 CATSPER1Q8NEC5 780 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 ZNF461Q8TAF7 563 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 CD300LFQ8TDQ1 290 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 SPRYD4Q8WW59 207 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-216ENST00000555550 ACOT11Q8WXI4 607 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-216ENST00000555550 C7orf34Q96L11 122 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 RIOK2Q9BVS4 552 aaKnown RBP1.88□□□□□ -2.11
SCFD1-216ENST00000555550 REEP4Q9H6H4 257 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 DBNDD1Q9H9R9 158 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 MEAF6Q9HAF1 191 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 SLC40A1Q9NP59 571 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 THUMPD1Q9NXG2 353 aaKnown RBP1.88□□□□□ -2.11
SCFD1-216ENST00000555550 GGA2Q9UJY4 613 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 NFASCO94856 1347 aa1.88□□□□□ -2.11
SCFD1-216ENST00000555550 GPR179Q6PRD1 2367 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 KIR2DS1A0A191URI9 304 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 PLAC8L1A1L4L8 177 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 F8WDY8 70 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 RGS16O15492 202 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-216ENST00000555550 TAPBPO15533 448 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 ADRA2AP08913 450 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 CSF3P09919 207 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 ZNF30P17039 623 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 PSMC3P17980 439 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 HTR2AP28223 471 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 GCAP28676 217 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 ACADVLP49748 655 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 KIR2DS1Q14954 304 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 TET2Q6N021 2002 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-216ENST00000555550 CNNM3Q8NE01 707 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 OR52P1PQ8NH57 321 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 MAIP1Q8WWC4 291 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 FAM3CQ92520 227 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 TUBGCP2Q9BSJ2 902 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 OSBPL11Q9BXB4 747 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 C1orf21Q9H246 121 aa1.87□□□□□ -2.11
SCFD1-216ENST00000555550 RANBP3Q9H6Z4 567 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms