RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 MUS81Q96NY9 551 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 CCL19Q99731 98 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 TMEM43Q9BTV4 400 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 PCDHAC1Q9H158 963 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 MYLK2Q9H1R3 596 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 NGBQ9NPG2 151 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 BEX4Q9NWD9 120 aaPredicted RBP18.02■□□□□ 0.48
VTI1B-205ENST00000555543 RNF115Q9Y4L5 304 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 SLC25A15Q9Y619 301 aa18.02■□□□□ 0.48
VTI1B-205ENST00000555543 MED13LQ71F56 2210 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 HS3ST1O14792 307 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 CLOCKO15516 846 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 HPRP00739 348 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 CLDN17P56750 224 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 SLC25A3Q00325 362 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 C8orf82Q6P1X6 216 aaPredicted RBP18.01■□□□□ 0.47
VTI1B-205ENST00000555543 H1FNTQ75WM6 255 aaPredicted RBP18.01■□□□□ 0.47
VTI1B-205ENST00000555543 KRTAP1-3Q8IUG1 177 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 SLC15A3Q8IY34 581 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 MICU2Q8IYU8 434 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 WDR31Q8NA23 367 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 POMGNT2Q8NAT1 580 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 OR6S1Q8NH40 331 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 RASSF5Q8WWW0 418 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 IGFBPL1Q8WX77 278 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 AKAP1Q92667 903 aaKnown RBP eCLIP18.01■□□□□ 0.47
VTI1B-205ENST00000555543 OXGR1Q96P68 337 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 ALKBH3Q96Q83 286 aaPredicted RBP18.01■□□□□ 0.47
VTI1B-205ENST00000555543 EPYCQ99645 322 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 ESRP2Q9H6T0 727 aaKnown RBP18.01■□□□□ 0.47
VTI1B-205ENST00000555543 SLC7A7Q9UM01 511 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 B3GALT5Q9Y2C3 310 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 SH3GLB1Q9Y371 365 aa18.01■□□□□ 0.47
VTI1B-205ENST00000555543 MTORP42345 2549 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 DSCAMO60469 2012 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 TRAPPC13A5PLN9 417 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 TRAF3IP2O43734 574 aaPredicted RBP18■□□□□ 0.47
VTI1B-205ENST00000555543 SNX3O60493 162 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF432O94892 652 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 CD3EP07766 207 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF43P17038 809 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 MPGP29372 298 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 LRRC23Q53EV4 343 aaPredicted RBP18■□□□□ 0.47
VTI1B-205ENST00000555543 ADAM5Q6NVV9 412 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 CARM1Q86X55 608 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 ADPRHL1Q8NDY3 354 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 KBTBD8Q8NFY9 601 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 PROX1Q92786 737 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 PIP5K1AQ99755 562 aa18■□□□□ 0.47
VTI1B-205ENST00000555543 ELOVL7A1L3X0 281 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 MS4A18H0YCH9 400 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 NME4O00746 187 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
VTI1B-205ENST00000555543 UPK3AO75631 287 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 HLA-DOBP13765 273 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 CDH2P19022 906 aaPredicted RBP17.99■□□□□ 0.47
VTI1B-205ENST00000555543 KDELR2P33947 212 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 SLC7A2P52569 658 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 ADAM8P78325 824 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 MFSD13AQ14CX5 517 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 MS4A18Q3C1V0 323 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 CYBRD1Q53TN4 286 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 OR7E24Q6IFN5 339 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 ARPINQ7Z6K5 226 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 TGIF2LYQ8IUE0 185 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 C1orf162Q8NEQ5 155 aaPredicted RBP17.99■□□□□ 0.47
VTI1B-205ENST00000555543 WFDC11Q8NEX6 87 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 PIGTQ969N2 578 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 PRSS27Q9BQR3 290 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF426Q9BUY5 554 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 SLC17A5Q9NRA2 495 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 BAG5Q9UL15 447 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 RCE1Q9Y256 329 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 CORINQ9Y5Q5 1042 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 ACANP16112 2415 aa17.99■□□□□ 0.47
VTI1B-205ENST00000555543 NQO1P15559 274 aaKnown RBP17.98■□□□□ 0.47
VTI1B-205ENST00000555543 HOXC12P31275 282 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 OR1E2P47887 323 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 NUDT2P50583 147 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF83P51522 516 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 GNGT1P63211 74 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 IL1RL1Q01638 556 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 LIPEQ05469 1076 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 SPOCK1Q08629 439 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 C1DQ13901 141 aaKnown RBP17.98■□□□□ 0.47
VTI1B-205ENST00000555543 SSX8Q7RTT4 187 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 WDFY1Q8IWB7 410 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 C17orf78Q8N4C9 275 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 C10orf53Q8N6V4 93 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF611Q8N823 705 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 SCAIQ8N9R8 606 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 ASPNQ9BXN1 380 aa17.98■□□□□ 0.47
VTI1B-205ENST00000555543 NSRP1Q9H0G5 558 aaKnown RBP17.98■□□□□ 0.47
VTI1B-205ENST00000555543 MRPL39Q9NYK5 338 aaKnown RBP17.98■□□□□ 0.47
VTI1B-205ENST00000555543 LOC102725191A0A1B0GVB3 256 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 GMNCA6NCL1 334 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 SHISA9B4DS77 424 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 ZNF587BE7ETH6 402 aa17.97■□□□□ 0.47
VTI1B-205ENST00000555543 KPNA4O00629 521 aaPredicted RBP17.97■□□□□ 0.47
VTI1B-205ENST00000555543 ABCD4O14678 606 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms