RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ATG16L1Q676U5 607 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 WBP2NLQ6ICG8 309 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 MDP1Q86V88 176 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 PEX5LQ8IYB4 626 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 C3orf56Q8N813 242 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 OR52P1PQ8NH57 321 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 CLDND2Q8NHS1 167 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 TESCQ96BS2 214 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF317Q96PQ6 595 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-212ENST00000555231 MRPL37Q9BZE1 423 aaKnown RBP11.31□□□□□ -0.6
XRCC3-212ENST00000555231 NOX3Q9HBY0 568 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 CRLF2Q9HC73 371 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 HIF1ANQ9NWT6 349 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 SEC14L4Q9UDX3 406 aa11.31□□□□□ -0.6
XRCC3-212ENST00000555231 A0A0A6YYJ9 748 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 CDHR4A6H8M9 788 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 E9PBE3 544 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 SLCO1B7G3V0H7 640 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 WNT9BO14905 357 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF432O94892 652 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 AHSA1O95433 338 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 HPXP02790 462 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 NUDT17P0C025 328 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 TFPTP0C1Z6 253 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 NCF2P19878 526 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ARR3P36575 388 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-212ENST00000555231 RPS5P46782 204 aaKnown RBP11.3□□□□□ -0.6
XRCC3-212ENST00000555231 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-212ENST00000555231 COPZ1P61923 177 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 CEACAM16Q2WEN9 425 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 SHQ1Q6PI26 577 aaKnown RBP11.3□□□□□ -0.6
XRCC3-212ENST00000555231 UGT2A3Q6UWM9 527 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 DEF8Q6ZN54 512 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF621Q6ZSS3 439 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 NUDCD3Q8IVD9 361 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ZFAND2BQ8WV99 257 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 GCDHQ92947 438 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-212ENST00000555231 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 TEX37Q96LM6 180 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 CCDC115Q96NT0 180 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 PANX1Q96RD7 426 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 TREM2Q9NZC2 230 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 BTNL2Q9UIR0 455 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 CMAHPQ9Y471 501 aa11.3□□□□□ -0.6
XRCC3-212ENST00000555231 FTCDNL1E5RQL4 147 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 RPL36A-HNRNPH2H7BZ11 118 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 NPIPB7O75200 414 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 SLC43A1O75387 559 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF43P17038 809 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 ALDH3B1P43353 468 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 ANXA11P50995 505 aaKnown RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 SEC24CP53992 1094 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 CLNS1AP54105 237 aaKnown RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 UFM1P61960 85 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 MAD2L1BPQ15013 274 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 DPY19L1Q2PZI1 675 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 RPS26P11Q5JNZ5 115 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 PHYHD1Q5SRE7 291 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 CLIP4Q8N3C7 705 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 LRRC37BQ96QE4 947 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 SYT3Q9BQG1 590 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 PTDSS2Q9BVG9 487 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 C20orf27Q9GZN8 174 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 MOV10Q9HCE1 1003 aaKnown RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 REV1Q9UBZ9 1251 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 ZNF443Q9Y2A4 671 aaPredicted RBP11.29□□□□□ -0.6
XRCC3-212ENST00000555231 SPEF1Q9Y4P9 236 aa11.29□□□□□ -0.6
XRCC3-212ENST00000555231 TMEM89A2RUT3 159 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 M0R233 179 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 SYNGR3O43761 229 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 HLA-HP01893 362 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 BCHEP06276 602 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 MSMBP08118 114 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 SAGP10523 405 aaPredicted RBP11.28□□□□□ -0.6
XRCC3-212ENST00000555231 LBPP18428 481 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 CBLP22681 906 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 NR4A1P22736 598 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 GTF2E2P29084 291 aaKnown RBP11.28□□□□□ -0.6
XRCC3-212ENST00000555231 IL12AP29459 219 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 ETV4P43268 484 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 COMPP49747 757 aaPredicted RBP11.28□□□□□ -0.6
XRCC3-212ENST00000555231 HOXC5Q00444 222 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 EGR4Q05215 589 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
XRCC3-212ENST00000555231 CHI3L2Q15782 390 aa11.28□□□□□ -0.6
XRCC3-212ENST00000555231 PEG10Q86TG7 708 aaKnown RBP11.28□□□□□ -0.6
XRCC3-212ENST00000555231 SERPINA11Q86U17 422 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms