RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MEX3BQ6ZN04 569 aaKnown RBP9.42□□□□□ -0.9
TMEM260-206ENST00000555046 ABHD12BQ7Z5M8 362 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-206ENST00000555046 VTCN1Q7Z7D3 282 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 GPAT4Q86UL3 456 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 CCDC103Q8IW40 242 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 DMRTC2Q8IXT2 367 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-206ENST00000555046 TMEM99Q8N816 258 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 RELL2Q8NC24 303 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-206ENST00000555046 FAM156AQ8NDB6 213 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 OR4D11Q8NGI4 311 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 TMEM239Q8WW34 195 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 APH1AQ96BI3 265 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF426Q9BUY5 554 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 AMBRA1Q9C0C7 1298 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 OR10A4Q9H209 315 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 FKRPQ9H9S5 495 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 KCNN3Q9UGI6 736 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF229Q9UJW7 825 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 CLEC4AQ9UMR7 237 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 GPR52Q9Y2T5 361 aa9.42□□□□□ -0.9
TMEM260-206ENST00000555046 IGKV1D-42A0A075B6H8 117 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 A0A1W2PRQ8 180 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF716A6NP11 495 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 FTCDNL1E5RQL4 147 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 FZD7O75084 574 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 KRT36O76013 467 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 GOSR1O95249 250 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 UMPSP11172 480 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 TNFRSF1BP20333 461 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 MSX2P35548 267 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-206ENST00000555046 IFNGR2P38484 337 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 OR3A2P47893 321 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 IL1RL1Q01638 556 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 TGFBR3Q03167 851 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 CHRNB3Q05901 458 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 DGCR6Q14129 220 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 CDSNQ15517 529 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 ANKDD1AQ495B1 522 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 FAM98BQ52LJ0 330 aaKnown RBP9.41□□□□□ -0.9
TMEM260-206ENST00000555046 C1QTNF12Q5T7M4 302 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 FBXW9Q5XUX1 488 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 VWA1Q6PCB0 445 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF730Q6ZMV8 503 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 CCDC121Q6ZUS5 278 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 AAED1Q7RTV5 226 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 PXKQ7Z7A4 578 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 OFCC1Q8IZS5 231 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 PIK3C3Q8NEB9 887 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 STEAP2Q8NFT2 490 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 OR5J2Q8NH18 312 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 FAM222BQ8WU58 562 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 TMEM45BQ96B21 275 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 SGTBQ96EQ0 304 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 DACH2Q96NX9 599 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 PIP5K1AQ99755 562 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 PTDSS2Q9BVG9 487 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 NDEL1Q9GZM8 345 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 OPN3Q9H1Y3 402 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-206ENST00000555046 YY1AP1Q9H869 796 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 NMNAT1Q9HAN9 279 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-206ENST00000555046 IL1RAPQ9NPH3 570 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 MRPL39Q9NYK5 338 aaKnown RBP9.41□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF226Q9NYT6 803 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 NDUFAF4Q9P032 175 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
TMEM260-206ENST00000555046 UPB1Q9UBR1 384 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 A4GNTQ9UNA3 340 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 NOX1Q9Y5S8 564 aa9.41□□□□□ -0.9
TMEM260-206ENST00000555046 HEATR5AQ86XA9 2040 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 AQP12BA6NM10 295 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 M0R082 166 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 GSC2O15499 205 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 KRT33AO76009 404 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 CH25HO95992 272 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 FABP3P05413 133 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 H1F0P07305 194 aaKnown RBP9.4□□□□□ -0.9
TMEM260-206ENST00000555046 EPXP11678 715 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 IGFBP2P18065 325 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 FUT1P19526 365 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 AHCYP23526 432 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 PAX7P23759 505 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 GRPRP30550 384 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 SSTR2P30874 369 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 YAP1P46937 504 aaKnown RBP9.4□□□□□ -0.9
TMEM260-206ENST00000555046 PUDPQ08623 228 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 ITGADQ13349 1161 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF74Q16587 644 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 EXOC3L2Q2M3D2 409 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 LCN8Q6JVE9 175 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 ZNF474Q6S9Z5 364 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-206ENST00000555046 Q6ZT83 130 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 CREB3L2Q70SY1 520 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 NUFIP2Q7Z417 695 aaKnown RBP9.4□□□□□ -0.9
TMEM260-206ENST00000555046 UEVLDQ8IX04 471 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 AQP12AQ8IXF9 295 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 UBE2J2Q8N2K1 259 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 POMGNT2Q8NAT1 580 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 ACBD4Q8NC06 268 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
TMEM260-206ENST00000555046 OR9K2Q8NGE7 335 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms