RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SPINT3P49223 89 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 CXCR4P61073 352 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 IL10RAQ13651 578 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 GPR18Q14330 331 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 CDRT4Q8N9R6 151 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 ZBTB8AQ96BR9 441 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 CMTM3Q96MX0 182 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 SLC29A1Q99808 456 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 PSD2Q9BQI7 771 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 WDR83Q9BRX9 315 aaKnown RBP6.42□□□□□ -1.38
SYNE2-216ENST00000555002 LIN7BQ9HAP6 207 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 PHF1O43189 567 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-216ENST00000555002 SCRG1O75711 98 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 EPOP01588 193 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 PRSS56P0CW18 603 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 ELAVL4P26378 380 aaKnown RBP6.42□□□□□ -1.38
SYNE2-216ENST00000555002 LAP3P28838 519 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 TRHRP34981 398 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-216ENST00000555002 ATP4BP51164 291 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 RTL8BQ17RB0 113 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 NPSR1Q6W5P4 371 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM64Q6YI46 380 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 CORO2AQ92828 525 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 FZD8Q9H461 694 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 IL26Q9NPH9 171 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 HCFC1R1Q9NWW0 138 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 OR6C76A6NM76 312 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 TAS2R19P59542 299 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF296Q8WUU4 475 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-216ENST00000555002 TRIB3Q96RU7 358 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 BABAM2Q9NXR7 383 aa6.42□□□□□ -1.38
SYNE2-216ENST00000555002 PLIN4Q96Q06 1357 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 A0A0U1RQS6 177 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TOX4O94842 621 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 KCNE1P15382 129 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 RGRP47804 291 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SLC35A1P78382 337 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 UNC5DQ6UXZ4 953 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF662Q6ZS27 426 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 GAL3ST2Q9H3Q3 398 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ANKRD19PQ9H560 264 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 HEBP1Q9NRV9 189 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SALL3Q9BXA9 1300 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SPP1P10451 314 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PSMB3P49720 205 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 OR2B11Q5JQS5 317 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 APOOLQ6UXV4 268 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM184AQ6ZMB5 413 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM25Q86YD3 366 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 KATNB1Q9BVA0 655 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PMS2P1A4D2B8 440 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 CBY3A6NI87 242 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 OR5G3P0C626 314 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 IQCF3P0C7M6 154 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 NPY1RP25929 384 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SORDQ00796 357 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF626Q68DY1 528 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ADIPOR2Q86V24 386 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 MARCH4Q9P2E8 410 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 RIMS3Q9UJD0 308 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ATRNO75882 1429 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF840PA6NDX5 716 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ARPC3O15145 178 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 LYRM1O43325 122 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SIGLEC6O43699 453 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 RGS11O94810 467 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 DRD1P21728 446 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 DCAF12L1Q5VU92 463 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 VPS25Q9BRG1 176 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 IKZF5Q9H5V7 419 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TAAR2Q9P1P5 351 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FETUBQ9UGM5 382 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PPP1R3CQ9UQK1 317 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 NAP1L6A6NFF2 107 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 F5H697 171 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FAM72CH0Y354 149 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 DEFA6Q01524 100 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 AVPI1Q5T686 147 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FAM72AQ5TYM5 149 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FAM72DQ6L9T8 149 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 GTF2H5Q6ZYL4 71 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PDZD3Q86UT5 571 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 FAM72BQ86X60 149 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 OR10AD1Q8NGE0 317 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 M1APQ8TC57 530 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 NAT6Q93015 286 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 PIGTQ969N2 578 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 APH1AQ96BI3 265 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SAP130Q9H0E3 1048 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 LINC00597Q9H2U6 94 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 LANCL2Q9NS86 450 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ENPP5Q9UJA9 477 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM235A6NFC5 223 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF593O00488 134 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-216ENST00000555002 IGHEP01854 428 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TUSC1Q2TAM9 212 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 SERPINA11Q86U17 422 aa6.41□□□□□ -1.38
SYNE2-216ENST00000555002 TSPYL5Q86VY4 417 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms