RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 C1QCP02747 245 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 HMGN2P05204 90 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 KRT16P08779 473 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ALDOCP09972 364 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 PSG1P11464 419 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 PEPDP12955 493 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CAPN3P20807 821 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 IL11P20809 199 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SHC1P29353 583 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CCKARP32238 428 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OPRM1P35372 400 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SOAT1P35610 550 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 PEX19P40855 299 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SLC6A8P48029 635 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CCT3P49368 545 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 RPL14P50914 215 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 DGKQP52824 942 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SLC18A1P54219 525 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CLDN20P56880 219 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 LINC00205P59089 165 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 C17orf67Q0P5P2 114 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 FUT5Q11128 374 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 FOXF1Q12946 379 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 MYBPHQ13203 477 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 MAD2L1Q13257 205 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 STX3Q13277 289 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CTU2Q2VPK5 515 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 NDUFAF6Q330K2 333 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 VPS26BQ4G0F5 336 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SPANXN4Q5MJ08 99 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 DCST2Q5T1A1 773 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SAXO2Q658L1 398 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OR4F3Q6IEY1 312 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 HEPHL1Q6MZM0 1159 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 COLCA1Q6ZS62 124 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OLIG3Q7RTU3 272 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CROCCP2Q86T23 111 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 TMEM200AQ86VY9 491 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ANKRD46Q86W74 232 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 MISPQ8IVT2 679 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 UBQLNLQ8IYU4 475 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 LRRC34Q8IZ02 419 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 KIRREL3Q8IZU9 778 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 GCNT2Q8N0V5 402 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CLEC4FQ8N1N0 589 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 GTPBP8Q8N3Z3 284 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ANKRD42Q8N9B4 389 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CHDHQ8NE62 594 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OR8J2Q8NGG1 315 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OR5D16Q8NGK9 328 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OR5AK3PQ8NH89 298 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 GOT1L1Q8NHS2 421 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 MGARPQ8TDB4 240 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 FAM222BQ8WU58 562 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 IGFBPL1Q8WX77 278 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SMPDL3BQ92485 455 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 AKAP1Q92667 903 aaKnown RBP eCLIP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 NRGNQ92686 78 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 TESCQ96BS2 214 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 MOAP1Q96BY2 351 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF524Q96C55 264 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 INTS12Q96CB8 462 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SH3YL1Q96HL8 342 aaPredicted RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ADGRG7Q96K78 797 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SLC35G5Q96KT7 338 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 TEX37Q96LM6 180 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 RNF145Q96MT1 663 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 OR7D2Q96RA2 312 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 PIGQQ9BRB3 760 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 GPATCH1Q9BRR8 931 aaKnown RBP3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF350Q9GZX5 532 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 CENPHQ9H3R5 247 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 PIGMQ9H3S5 423 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 PTGES2Q9H7Z7 377 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 RNF122Q9H9V4 155 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 KCNK9Q9NPC2 374 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 UBQLN4Q9NRR5 601 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 MED17Q9NVC6 651 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ATAD3AQ9NVI7 634 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 AIG1Q9NVV5 245 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 TMEM45AQ9NWC5 275 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 VDAC3Q9Y277 283 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF337Q9Y3M9 751 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF175Q9Y473 711 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 SNX8Q9Y5X2 465 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 AP4B1Q9Y6B7 739 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 FREM1Q5H8C1 2179 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 HIVEP1P15822 2718 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 ROS1P08922 2347 aa3.7□□□□□ -1.82
VTI1B-203ENST00000554636 A0A1W2PPR1 153 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 SERINC4A6NH21 518 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 TUBAL3A6NHL2 446 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 SLC22A20A6NK97 555 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 A6NNC1 897 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 A8MXE2 369 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 C9JVG2 144 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 E9PBE3 544 aa3.69□□□□□ -1.82
VTI1B-203ENST00000554636 ZNF195O14628 629 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms