RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 CHST11Q9NPF2 352 aa15.33■□□□□ 0.04
TUBB3-205ENST00000554336 TIGARQ9NQ88 270 aa15.33■□□□□ 0.04
TUBB3-205ENST00000554336 DNAJB9Q9UBS3 223 aa15.33■□□□□ 0.04
TUBB3-205ENST00000554336 FREM1Q5H8C1 2179 aa15.33■□□□□ 0.04
TUBB3-205ENST00000554336 CACNA1CQ13936 2221 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 CLOCKO15516 846 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 EIF1BO60739 113 aaKnown RBP15.32■□□□□ 0.04
TUBB3-205ENST00000554336 TNFSF13O75888 250 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 RCBTB2O95199 551 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 FCGR2AP12318 317 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 SMIM11AP58511 58 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 SF3B4Q15427 424 aaKnown RBP eCLIP15.32■□□□□ 0.047e-7■■■■□ 24
TUBB3-205ENST00000554336 RIPPLY2Q5TAB7 128 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 PGBD2Q6P3X8 592 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 MTFR2Q6P444 385 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 P4HA3Q7Z4N8 544 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 ZER1Q7Z7L7 766 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 AMIGO2Q86SJ2 522 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 CCDC71Q8IV32 467 aaPredicted RBP15.32■□□□□ 0.04
TUBB3-205ENST00000554336 RNF113BQ8IZP6 322 aaKnown RBP15.32■□□□□ 0.04
TUBB3-205ENST00000554336 KDM8Q8N371 416 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 OR13C2Q8NGS9 318 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 INTS12Q96CB8 462 aaKnown RBP15.32■□□□□ 0.04
TUBB3-205ENST00000554336 TM9SF2Q99805 663 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 YY1AP1Q9H869 796 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 MRPL39Q9NYK5 338 aaKnown RBP15.32■□□□□ 0.04
TUBB3-205ENST00000554336 ZNF229Q9UJW7 825 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 MAGED1Q9Y5V3 778 aaPredicted RBP15.32■□□□□ 0.04
TUBB3-205ENST00000554336 AKAP9Q99996 3911 aa15.32■□□□□ 0.04
TUBB3-205ENST00000554336 MS4A18H0YCH9 400 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 C19orf84I3L1E1 186 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 SS18L1O75177 396 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-205ENST00000554336 TSPAN19P0C672 248 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 ZNF26P17031 533 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-205ENST00000554336 EDNRAP25101 427 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 AGTR1P30556 359 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 UQCRC1P31930 480 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 NTF4P34130 210 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 SLC16A1P53985 500 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 RPS4XP62701 263 aaKnown RBP15.31■□□□□ 0.04
TUBB3-205ENST00000554336 SLC17A1Q14916 467 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 MS4A18Q3C1V0 323 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 TMPRSS11FQ6ZWK6 438 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 LIX1LQ8IVB5 337 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 SCAIQ8N9R8 606 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 ADPRHL1Q8NDY3 354 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 OR5J2Q8NH18 312 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 ZHX1-C8orf76Q96EF9 292 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 PKP2Q99959 881 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 PRRG4Q9BZD6 226 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 BCO1Q9HAY6 547 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 NANSQ9NR45 359 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 RNF6Q9Y252 685 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 CORINQ9Y5Q5 1042 aa15.31■□□□□ 0.04
TUBB3-205ENST00000554336 IGKV3D-15A0A087WSY6 115 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 TRAV27A0A087WT01 109 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 A0A1W2PNV4 684 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 PLPP3O14495 311 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 RRP9O43818 475 aaKnown RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 OR10H3O60404 316 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 DEAF1O75398 565 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 TMIGD3P0DMS9 266 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 HLA-DOBP13765 273 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 COX6B1P14854 86 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 GTF2E2P29084 291 aaKnown RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 KIR2DL2P43627 348 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 FXYD6P3P58550 94 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 RASGEF1BQ0VAM2 473 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 MFSD13AQ14CX5 517 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 MICAQ29983 383 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 ANKRD34AQ69YU3 496 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 VWA1Q6PCB0 445 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 XKRXQ6PP77 449 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 NHLRC1Q6VVB1 395 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 H1FNTQ75WM6 255 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 WDFY1Q8IWB7 410 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 TUSC5Q8IXB3 177 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 SLC43A2Q8N370 569 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 ZIC4Q8N9L1 334 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 PIGXQ8TBF5 258 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 GMPPAQ96IJ6 420 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-205ENST00000554336 ASPNQ9BXN1 380 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 S100A14Q9HCY8 104 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 TAS2R5Q9NYW4 299 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 TMCC3Q9ULS5 477 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 B3GALT5Q9Y2C3 310 aa15.3■□□□□ 0.04
TUBB3-205ENST00000554336 ALPK2Q86TB3 2170 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 EFCAB9A8MZ26 197 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 TRAF3IP2O43734 574 aaPredicted RBP15.29■□□□□ 0.04
TUBB3-205ENST00000554336 CCNB2O95067 398 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 IL2RAP01589 272 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 FASP25445 335 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 DNAJA1P31689 397 aaKnown RBP15.29■□□□□ 0.04
TUBB3-205ENST00000554336 SIRPAP78324 504 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 RPL18Q07020 188 aaKnown RBP15.29■□□□□ 0.04
TUBB3-205ENST00000554336 PMS2P3Q13401 168 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 PDK3Q15120 406 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 RNPS1Q15287 305 aaKnown RBP15.29■□□□□ 0.04
TUBB3-205ENST00000554336 TMEM211Q6ICI0 200 aa15.29■□□□□ 0.04
TUBB3-205ENST00000554336 C1orf94Q6P1W5 598 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms