RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 CLIP4Q8N3C7 705 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
TUBB3-204ENST00000554116 PIGXQ8TBF5 258 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 C3orf49Q96BT1 292 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 DDIT4LQ96D03 193 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 ZHX1-C8orf76Q96EF9 292 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 SIKE1Q9BRV8 207 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 SPATA9Q9BWV2 254 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 BPESC1Q9GZL8 116 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 ADAM19Q9H013 955 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 SEC61A2Q9H9S3 476 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 BCL2L10Q9HD36 194 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 VAPAQ9P0L0 249 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 OSGIN1Q9UJX0 560 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 PRDM4Q9UKN5 801 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 TRAPPC4Q9Y296 219 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 HDGFL3Q9Y3E1 203 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 PMF1-BGLAPU3KQ54 211 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 VWFP04275 2813 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 PRKDCP78527 4128 aaKnown RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM129A0AVI4 362 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM72A0PK05 275 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 LRP5LA4QPB2 252 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 EVPLLA8MZ36 301 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 NDUFS8O00217 210 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 GPR171O14626 319 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF208O43345 1280 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 DNPH1O43598 174 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 TCF21O43680 179 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 LILRA1O75019 489 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 TGFAP01135 160 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 APEHP13798 732 aaKnown RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF23P17027 643 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 CXCR1P25024 350 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ACAA2P42765 397 aaKnown RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 P2RY4P51582 365 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 MAP2K6P52564 334 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 OR2B6P58173 313 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 COPZ1P61923 177 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 CHRNB3Q05901 458 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ADIPOQQ15848 244 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 GCNT6Q5T4J0 391 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 RNF220Q5VTB9 566 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 PRAMEF8Q5VWM4 474 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 PRAMEF7Q5VXH5 474 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 METTL21CQ5VZV1 264 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 CASP12Q6UXS9 341 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 C12orf54Q6X4T0 127 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 DEPDC4Q8N2C3 294 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ZCCHC24Q8N2G6 241 aaKnown RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 CADM2Q8N3J6 435 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 C17orf78Q8N4C9 275 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 RFLNBQ8N5W9 214 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 NFKBIDQ8NI38 313 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF385AQ96PM9 386 aaKnown RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 NELFAQ9H3P2 528 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF385DQ9H6B1 395 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 FKRPQ9H9S5 495 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 LEF1Q9UJU2 399 aaPredicted RBP10.04□□□□□ -0.8
TUBB3-204ENST00000554116 AMDHD2Q9Y303 409 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 NDUFAF1Q9Y375 327 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 GMEB1Q9Y692 573 aa10.04□□□□□ -0.8
TUBB3-204ENST00000554116 TRBV5-3A0A0A0MS03 114 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 LOC390937A0A1W2PQ73 354 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.8
TUBB3-204ENST00000554116 ARAFP10398 606 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 PRG2P13727 222 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 ITGA2P17301 1181 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 GPX2P18283 190 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 CFPP27918 469 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 MPGP29372 298 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 CALCRP30988 508 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 CDK6Q00534 326 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 HGFACQ04756 655 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 RUNDC3AQ59EK9 446 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 WBP2NLQ6ICG8 309 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 DLEU7Q6UYE1 221 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 SERPINA11Q86U17 422 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 MYPOPQ86VE0 399 aaPredicted RBP10.03□□□□□ -0.8
TUBB3-204ENST00000554116 C10orf111Q8N326 155 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM99Q8N816 258 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM45BQ96B21 275 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 ZMYND19Q96E35 227 aaPredicted RBP10.03□□□□□ -0.8
TUBB3-204ENST00000554116 PIMREGQ9BSJ6 248 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM120AQ9BXJ8 343 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 PLK3Q9H4B4 646 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 IKZF5Q9H5V7 419 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 CORO2BQ9UQ03 480 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 CHST2Q9Y4C5 530 aa10.03□□□□□ -0.8
TUBB3-204ENST00000554116 ANGPT2O15123 496 aa10.02□□□□□ -0.81
TUBB3-204ENST00000554116 EIF1BO60739 113 aaKnown RBP10.02□□□□□ -0.81
TUBB3-204ENST00000554116 STAMBPO95630 424 aa10.02□□□□□ -0.81
TUBB3-204ENST00000554116 VIMP08670 466 aaKnown RBP10.02□□□□□ -0.81
TUBB3-204ENST00000554116 TACSTD2P09758 323 aa10.02□□□□□ -0.81
TUBB3-204ENST00000554116 ETS2P15036 469 aa10.02□□□□□ -0.81
TUBB3-204ENST00000554116 SLC6A2P23975 617 aa10.02□□□□□ -0.81
TUBB3-204ENST00000554116 GIFP27352 417 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms