RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 OR51A7Q8NH64 312 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 ZPLD1Q8TCW7 415 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 WDYHV1Q96HA8 205 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF570Q96NI8 536 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 SLC38A2Q96QD8 506 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 PITX2Q99697 317 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 GPA33Q99795 319 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 GRIP2Q9C0E4 1043 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 INIPQ9NRY2 104 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 GTF3C1Q12789 2109 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 USP24Q9UPU5 2620 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 A0A1B0GTH9 108 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 LOC102725191A0A1B0GVB3 256 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 ZAR1LA6NP61 321 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 TTLL8A6PVC2 850 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 LRRN3E7EW58 273 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 IMPA2O14732 288 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 SLC16A6O15403 523 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 RNF13O43567 381 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 CXCL13O43927 109 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 MPZL2O60487 215 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 MITFO75030 526 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-210ENST00000553950 PTP4A3O75365 173 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 AKR7A3O95154 331 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 IFNGP01579 166 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 IGHMP01871 453 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 HMGN1P05114 100 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 CD14P08571 375 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 HOXD4P09016 255 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-210ENST00000553950 NR2C1P13056 603 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 ABOP16442 354 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 POU1F1P28069 291 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 GRK5P34947 590 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 STARP49675 285 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 TDGF1P3P51864 188 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 H3F3AP84243 136 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 SRYQ05066 204 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 LTBQ06643 244 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 LY6DQ14210 128 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 RNPS1Q15287 305 aaKnown RBP12.99□□□□□ -0.33
SHMT2-210ENST00000553950 PGGHGQ32M88 737 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 TMEM225Q6GV28 225 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 CASP12Q6UXS9 341 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 MEX3DQ86XN8 651 aaKnown RBP12.99□□□□□ -0.33
SHMT2-210ENST00000553950 UEVLDQ8IX04 471 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 LRRC17Q8N6Y2 441 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 CYGBQ8WWM9 190 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
SHMT2-210ENST00000553950 HRASLS5Q96KN8 279 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 MBOAT4Q96T53 435 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 IFT27Q9BW83 186 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 TSSK6Q9BXA6 273 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 POLDIP3Q9BY77 421 aaKnown RBP12.99□□□□□ -0.33
SHMT2-210ENST00000553950 PRRG4Q9BZD6 226 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 EGLN3Q9H6Z9 239 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 GP6Q9HCN6 339 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 IMPAD1Q9NX62 359 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 EMC3Q9P0I2 261 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 KLHL9Q9P2J3 617 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 GMPPBQ9Y5P6 360 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 HSPE1-MOB4S4R3N1 261 aa12.99□□□□□ -0.33
SHMT2-210ENST00000553950 LOC100130705A0A1B0GUX0 176 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 A6NIZ1 184 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 MCIDASD6RGH6 385 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 GPR171O14626 319 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 ARPC3O15145 178 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 OPN1LWP04000 364 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF43P17038 809 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 AHCYP23526 432 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 NOS3P29474 1203 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 AQP2P41181 271 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 SUCLG1P53597 346 aaKnown RBP12.98□□□□□ -0.33
SHMT2-210ENST00000553950 RAP1BP61224 184 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 RAP1AP62834 184 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 C1DQ13901 141 aaKnown RBP12.98□□□□□ -0.33
SHMT2-210ENST00000553950 PDK3Q15120 406 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
SHMT2-210ENST00000553950 EIF2S3LQ2VIR3 472 aaKnown RBP12.98□□□□□ -0.33
SHMT2-210ENST00000553950 ZIK1Q3SY52 487 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-210ENST00000553950 SLX4IPQ5VYV7 408 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 GFRALQ6UXV0 394 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 FCRLAQ7L513 359 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 ADCK1Q86TW2 530 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 KIF18BQ86Y91 864 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 MCEMP1Q8IX19 187 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 LNX2Q8N448 690 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 RNF128Q8TEB7 428 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 PLEKHA8Q96JA3 519 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 OXGR1Q96P68 337 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 TNFRSF13CQ96RJ3 184 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 SRXN1Q9BYN0 137 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 GLRX2Q9NS18 164 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
SHMT2-210ENST00000553950 KLHL21Q9UJP4 597 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms