RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 INTS12Q96CB8 462 aaKnown RBP10.91□□□□□ -0.66
SHMT2-209ENST00000553949 GMPPAQ96IJ6 420 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-209ENST00000553949 PSD2Q9BQI7 771 aa10.91□□□□□ -0.66
SHMT2-209ENST00000553949 SF3B5Q9BWJ5 86 aaKnown RBP10.91□□□□□ -0.66
SHMT2-209ENST00000553949 GP6Q9HCN6 339 aa10.91□□□□□ -0.66
SHMT2-209ENST00000553949 GLRX2Q9NS18 164 aa10.91□□□□□ -0.66
SHMT2-209ENST00000553949 ING1Q9UK53 422 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-209ENST00000553949 CLEC4AQ9UMR7 237 aa10.91□□□□□ -0.66
SHMT2-209ENST00000553949 MAGED1Q9Y5V3 778 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-209ENST00000553949 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
SHMT2-209ENST00000553949 ZGRF1Q86YA3 2104 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 IGKV3D-15A0A087WSY6 115 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TRAV27A0A087WT01 109 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 A0A0G2JNJ9 132 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 LOC102725191A0A1B0GVB3 256 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 UNC119BA6NIH7 251 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 G3V2T6 193 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 MS4A18H0YCH9 400 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 H0YHG0 523 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 BLOC1S5-TXNDC5H3BN57 136 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 SS18L1O75177 396 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-209ENST00000553949 HPRP00739 348 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 ADORA3P0DMS8 318 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TMIGD3P0DMS9 266 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-209ENST00000553949 POU2F1P14859 743 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 AHCYP23526 432 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 UQCRC1P31930 480 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 AQP2P41181 271 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 RPS4XP62701 263 aaKnown RBP10.9□□□□□ -0.66
SHMT2-209ENST00000553949 IL1RL1Q01638 556 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 PUDPQ08623 228 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 ZP4Q12836 540 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 FOXF2Q12947 444 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TSPAN31Q12999 210 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 FHL1Q13642 323 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 SLC17A1Q14916 467 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 GUSBP1Q15486 140 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 MS4A18Q3C1V0 323 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 ANKDD1AQ495B1 522 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 MTFR2Q6P444 385 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 OAFQ86UD1 273 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TUSC5Q8IXB3 177 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 GCNT2Q8N0V5 402 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 PQLC1Q8N2U9 271 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 OR9K2Q8NGE7 335 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 OR51A7Q8NH64 312 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 CCDC120Q96HB5 630 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 ZFP3Q96NJ6 502 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 OXGR1Q96P68 337 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TNFRSF13CQ96RJ3 184 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 FEVQ99581 238 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TACO1Q9BSH4 297 aaKnown RBP10.9□□□□□ -0.66
SHMT2-209ENST00000553949 BCO1Q9HAY6 547 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 TAS2R5Q9NYW4 299 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 B3GAT1Q9P2W7 334 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 Q9UFV3 132 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 MGAT4BQ9UQ53 548 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 SLC5A6Q9Y289 635 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 HIF3AQ9Y2N7 669 aa10.9□□□□□ -0.66
SHMT2-209ENST00000553949 GTF3C1Q12789 2109 aa10.9□□□□□ -0.67
SHMT2-209ENST00000553949 RP1L1Q8IWN7 2480 aaPredicted RBP10.9□□□□□ -0.67
SHMT2-209ENST00000553949 HSPB2A8KAH6 182 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF724A8MTY0 619 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 J3QKU1 62 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 RNF13O43567 381 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 PTP4A3O75365 173 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ADAP00813 363 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 CRHP06850 196 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 YES1P07947 543 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 TSPAN19P0C672 248 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF23P17027 643 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 PRKACGP22612 351 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 CTSSP25774 331 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 AGTR1P30556 359 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 GSSP48637 474 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ADORA2A-AS1P86434 159 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 RPL18Q07020 188 aaKnown RBP10.89□□□□□ -0.67
SHMT2-209ENST00000553949 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
SHMT2-209ENST00000553949 RCN1Q15293 331 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 POU4F3Q15319 338 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 HSPB2Q16082 182 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ZBED5Q49AG3 693 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 TMEM201Q5SNT2 666 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 FAM214BQ7L5A3 538 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 PXKQ7Z7A4 578 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 HIPK1Q86Z02 1210 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ZDHHC13Q8IUH4 622 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 EPHX4Q8IUS5 362 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 SVOPLQ8N434 492 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ICA1LQ8NDH6 482 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 MOSPD2Q8NHP6 518 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ZNF775Q96BV0 537 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-209ENST00000553949 DGCR6LQ9BY27 220 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 MCCC2Q9HCC0 563 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 FANCFQ9NPI8 374 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 EMC3Q9P0I2 261 aa10.89□□□□□ -0.67
SHMT2-209ENST00000553949 ERRFI1Q9UJM3 462 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms