RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ANKRD13BQ86YJ7 626 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 CCDC103Q8IW40 242 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 CDK20Q8IZL9 346 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF527Q8NB42 609 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 NEIL3Q8TAT5 605 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 GGHQ92820 318 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 MED17Q9NVC6 651 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 CRIM1Q9NZV1 1036 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 SLC35A3Q9Y2D2 325 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 NF1P21359 2839 aa14.44□□□□□ -0.1
ACTN1-209ENST00000553659 OR6C76A6NM76 312 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 AHRRA9YTQ3 701 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 H3BMQ9 156 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 M0R3G1 203 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 HRKO00198 91 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 FRS3O43559 492 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 TPST2O60704 377 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 DNASE1P24855 282 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 UQCRC1P31930 480 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 PPICP45877 212 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 OMPP47874 163 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 GIPRP48546 466 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 FGFBP1Q14512 234 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 OR1Q1Q15612 314 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 MAPK14Q16539 360 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 SMN1Q16637 294 aaKnown RBP14.43□□□□□ -0.1
ACTN1-209ENST00000553659 PRAMEF20Q5VT98 475 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 RNLSQ5VYX0 342 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 LRRC46Q96FV0 321 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 COG8Q96MW5 612 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 SLC6A15Q9H2J7 730 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 SELENONQ9NZV5 590 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 ENPP5Q9UJA9 477 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 SLC7A7Q9UM01 511 aa14.43□□□□□ -0.1
ACTN1-209ENST00000553659 CHCHD2Q9Y6H1 151 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-209ENST00000553659 EXPH5Q8NEV8 1989 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 FRG2CA6NGY1 282 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 LRRC3CA6NJW4 275 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 NPIPB9F8W1W9 429 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 DVL2O14641 736 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 CHP2O43745 196 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 SOX14O95416 240 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 FADS2O95864 444 aaKnown RBP14.42□□□□□ -0.1
ACTN1-209ENST00000553659 TP53P04637 393 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-209ENST00000553659 HMGN1P05114 100 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 FBXO45P0C2W1 286 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 FUT4P22083 530 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 CEACAM8P31997 349 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-209ENST00000553659 GP2P55259 537 aaKnown RBP14.42□□□□□ -0.1
ACTN1-209ENST00000553659 GINS1Q14691 196 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 NPSR1Q6W5P4 371 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 SLC29A4Q7RTT9 530 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF367Q7RTV3 350 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 CDC20BQ86Y33 519 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 LSMEM1Q8N8F7 131 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 RELL2Q8NC24 303 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-209ENST00000553659 OR10G3Q8NGC4 313 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 FAM222BQ8WU58 562 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 UBE2FQ969M7 185 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 JSRP1Q96MG2 331 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-209ENST00000553659 CDCA4Q9BXL8 241 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 ITPAQ9BY32 194 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 CTPS2Q9NRF8 586 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 KCNE5Q9UJ90 142 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 PLEKHA6Q9Y2H5 1048 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 CDH10Q9Y6N8 788 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 DOCK7Q96N67 2140 aa14.42□□□□□ -0.1
ACTN1-209ENST00000553659 A6NNC1 897 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 SLC22A1O15245 554 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 KLF4O43474 513 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 GABARAPO95166 117 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 IL33O95760 270 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 CT45A8P0DMV1 189 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 CT45A9P0DMV2 189 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 BMP5P22003 454 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 PSMB9P28065 219 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 TIMP3P35625 211 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 SLC15A1P46059 708 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 ASCL1P50553 236 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 SLC37A1P57057 533 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 PIGFQ07326 219 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.41□□□□□ -0.1
ACTN1-209ENST00000553659 FOXD4Q12950 439 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-209ENST00000553659 NTRK2Q16620 822 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 FBXL19-AS1Q494R0 122 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 CT45A2Q5DJT8 189 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 PDZK1Q5T2W1 519 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 TMEM236Q5W0B7 351 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 NAXEQ8NCW5 288 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 DOK4Q8TEW6 326 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 TMEM239Q8WW34 195 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 SGCDQ92629 289 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 RNASE6Q93091 150 aaKnown RBP14.41□□□□□ -0.1
ACTN1-209ENST00000553659 FUNDC2Q9BWH2 189 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 IL20Q9NYY1 176 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 RPS6KB2Q9UBS0 482 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF629Q9UEG4 869 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-209ENST00000553659 FOXD3Q9UJU5 478 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-209ENST00000553659 MED31Q9Y3C7 131 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 KIAA1549Q9HCM3 1950 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms