RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 PGM2L1Q6PCE3 622 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 CYP2R1Q6VVX0 501 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 FKBP9P1Q75LS8 142 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 DHFR2Q86XF0 187 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 LSMEM1Q8N8F7 131 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 OR4D11Q8NGI4 311 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 STK35Q8TDR2 534 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 GEMIN6Q8WXD5 167 aaKnown RBP20.85■□□□□ 0.93
TDP1-205ENST00000553527 OR10A4Q9H209 315 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 FLVCR1Q9Y5Y0 555 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 V9GYQ6 96 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 DSCAMO60469 2012 aa20.85■□□□□ 0.93
TDP1-205ENST00000553527 TPST2O60704 377 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 NPIPB7O75200 414 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 PTNP21246 168 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 CBLP22681 906 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 OR1E2P47887 323 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 EGR4Q05215 589 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 NPTX1Q15818 432 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 MTX3Q5HYI7 312 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 LCN8Q6JVE9 175 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 ULK3Q6PHR2 472 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 RBM45Q8IUH3 476 aaKnown RBP20.84■□□□□ 0.93
TDP1-205ENST00000553527 DNAJA4Q8WW22 397 aaPredicted RBP20.84■□□□□ 0.93
TDP1-205ENST00000553527 HSD17B8Q92506 261 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 MCHR1Q99705 422 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 TRIM15Q9C019 465 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 MMADHCQ9H3L0 296 aaPredicted RBP20.84■□□□□ 0.93
TDP1-205ENST00000553527 UPB1Q9UBR1 384 aa20.84■□□□□ 0.93
TDP1-205ENST00000553527 CIB4A0PJX0 185 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 AQP7P3A6NL99 342 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 FMO6PO60774 539 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 ATE1O95260 518 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 GTF2E2P29084 291 aaKnown RBP20.83■□□□□ 0.93
TDP1-205ENST00000553527 MS4A2Q01362 244 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 C9orf135Q5VTT2 229 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 DEF8Q6ZN54 512 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 ASRGL1Q7L266 308 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 KDM8Q8N371 416 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 OR9K2Q8NGE7 335 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 SLC47A1Q96FL8 570 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 LRGUKQ96M69 825 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 ZNF385AQ96PM9 386 aaKnown RBP20.83■□□□□ 0.93
TDP1-205ENST00000553527 PARPBPQ9NWS1 579 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 ASB6Q9NWX5 421 aa20.83■□□□□ 0.93
TDP1-205ENST00000553527 RAD51DO75771 328 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 PLAUP00749 431 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 IFNW1P05000 195 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 PNMTP11086 282 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 LOXP28300 417 aaPredicted RBP20.82■□□□□ 0.92
TDP1-205ENST00000553527 TRAP1Q12931 704 aaKnown RBP20.82■□□□□ 0.92
TDP1-205ENST00000553527 AAED1Q7RTV5 226 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 ZNF433Q8N7K0 673 aaPredicted RBP20.82■□□□□ 0.92
TDP1-205ENST00000553527 FAM86B1Q8N7N1 296 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 MFSD8Q8NHS3 518 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 TAAR8Q969N4 342 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 PTDSS2Q9BVG9 487 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 C12orf10Q9HB07 376 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 SLC7A8Q9UHI5 535 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 ROS1P08922 2347 aa20.82■□□□□ 0.92
TDP1-205ENST00000553527 CPSF4LA6NMK7 179 aaKnown RBP20.81■□□□□ 0.92
TDP1-205ENST00000553527 CNOT4O95628 575 aaKnown RBP20.81■□□□□ 0.92
TDP1-205ENST00000553527 FOXG1P55316 489 aaPredicted RBP20.81■□□□□ 0.92
TDP1-205ENST00000553527 FLOT2Q14254 428 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 ENTPD8Q5MY95 495 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 YTHDF3Q7Z739 585 aaKnown RBP20.81■□□□□ 0.92
TDP1-205ENST00000553527 ZIC4Q8N9L1 334 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 SLC38A4Q969I6 547 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 FOXC2Q99958 501 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 SF3B5Q9BWJ5 86 aaKnown RBP20.81■□□□□ 0.92
TDP1-205ENST00000553527 SEC14L4Q9UDX3 406 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 MED13LQ71F56 2210 aa20.81■□□□□ 0.92
TDP1-205ENST00000553527 MAP1AP78559 2803 aaPredicted RBP20.8■□□□□ 0.92
TDP1-205ENST00000553527 ACOT8O14734 319 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 CD53P19397 219 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 P2RY4P51582 365 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 NR1H2P55055 460 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 CDH12P55289 794 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 IL1RL1Q01638 556 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 ACKR1Q16570 336 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 DEFB113Q30KQ7 82 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 TSPO2Q5TGU0 170 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 ZNF613Q6PF04 617 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 MUCL1Q96DR8 90 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 PYURFQ96I23 114 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 NGBQ9NPG2 151 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 SLC7A10Q9NS82 523 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 POMPQ9Y244 141 aa20.8■□□□□ 0.92
TDP1-205ENST00000553527 IGKV1D-42A0A075B6H8 117 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 A0A087WUJ7 227 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 A0A0B4J2E0 115 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 A0A1B0GX12 115 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 A0A1W2PR80 420 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 FTCDNL1E5RQL4 147 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 COX5AP20674 150 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 TAS2R41P59536 307 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 PPA1Q15181 289 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 SPNS3Q6ZMD2 512 aa20.79■□□□□ 0.92
TDP1-205ENST00000553527 ZNF704Q6ZNC4 412 aaPredicted RBP20.79■□□□□ 0.92
TDP1-205ENST00000553527 CREB3L2Q70SY1 520 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms