RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 hCG_2039718K7EN88 272 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 SLC28A1O00337 649 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ANKRD28O15084 1053 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CYP7B1O75881 506 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 C6orf47O95873 294 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CSTAP01040 98 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 IGKV3-15P01624 115 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CRYAAP02489 173 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 GSTA1P08263 222 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 KRT16P08779 473 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TFPIP10646 304 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 BCKDHAP12694 445 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CLK1P49759 484 aaKnown RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 NAA20P61599 178 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 POU3F1Q03052 451 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 HGFACQ04756 655 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 FUT5Q11128 374 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 GPR68Q15743 365 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 AWAT1Q58HT5 328 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 AP1ARQ63HQ0 302 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 C8orf74Q6P047 294 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 KLHL24Q6TFL4 600 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 LINGO2Q7L985 606 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 GRINAQ7Z429 371 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ADGRG3Q86Y34 549 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CDK20Q8IZL9 346 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 SVOPLQ8N434 492 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 OR1K1Q8NGR3 316 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 OR5AK3PQ8NH89 298 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CLDND2Q8NHS1 167 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF418Q8TF45 676 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 OR5P2Q8WZ92 322 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 GCDHQ92947 438 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM186Q96B77 213 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 CCDC126Q96EE4 140 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF385AQ96PM9 386 aaKnown RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ALKBH3Q96Q83 286 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 DOK1Q99704 481 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 RBM4Q9BWF3 364 aaKnown RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 RACGAP1Q9H0H5 632 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF696Q9H7X3 374 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 HIF1ANQ9NWT6 349 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM181Q9P2C4 612 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 GIMAP2Q9UG22 337 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 PYCARDQ9ULZ3 195 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 FAF1Q9UNN5 650 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TRAPPC4Q9Y296 219 aa6.27□□□□□ -1.41
ATXN3-219ENST00000553488 TANC2Q9HCD6 1990 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM72A0PK05 275 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 LYNX1G3V0Z9 82 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 TRIM77I1YAP6 450 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 AZIN1O14977 448 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 EIF1BO60739 113 aaKnown RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 STX11O75558 287 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 CRCPO75575 148 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 LGI1O95970 557 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 AK1P00568 194 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 MSMBP08118 114 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 CELA3BP08861 270 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 ABHD2P08910 425 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 LYNX1P0DP58 116 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 MYL2P10916 166 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 CDH2P19022 906 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 THBS4P35443 961 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 HPCAL1P37235 193 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 SLC1A3P43003 542 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 P2RY4P51582 365 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 OR2B6P58173 313 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 DNAJB13P59910 316 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 TUBA1BP68363 451 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 TUBA4AP68366 448 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 SLC35A1P78382 337 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 PTGR1Q14914 329 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 ARHGAP11BQ3KRB8 267 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 XKR7Q5GH72 579 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 ELFN2Q5R3F8 820 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 KANK2Q63ZY3 851 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 STEAP3Q658P3 488 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 TYW3Q6IPR3 259 aaKnown RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 ANKRD16Q6P6B7 361 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 PAQR6Q6TCH4 344 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 UGT2A3Q6UWM9 527 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 FRRS1Q6ZNA5 592 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 TUBA1AQ71U36 451 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 EIF3MQ7L2H7 374 aaKnown RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 R3HCC1LQ7Z5L2 792 aaKnown RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 CARM1Q86X55 608 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 POMGNT2Q8NAT1 580 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 OR4F15Q8NGB8 312 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 OR9K2Q8NGE7 335 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 MAGEE2Q8TD90 523 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 ACMSDQ8TDX5 336 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 WDR60Q8WVS4 1066 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 OIT3Q8WWZ8 545 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 BCL2L2Q92843 193 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-219ENST00000553488 MOAP1Q96BY2 351 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 FMO2Q99518 471 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 KCNS3Q9BQ31 491 aa6.26□□□□□ -1.41
ATXN3-219ENST00000553488 ESM1Q9NQ30 184 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms