RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 A0A1W2PRG6 482 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 OR6C68A6NDL8 312 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 METTL12A8MUP2 240 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 PRR33A8MZF0 331 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 SCO2O43819 266 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 ASAH2BP0C7U1 165 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 EDNRAP25101 427 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 TNK1Q13470 666 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 DYRK1AQ13627 763 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 CEP78Q5JTW2 689 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 UBE2NLQ5JXB2 153 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 SLC22A10Q63ZE4 541 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 GPR139Q6DWJ6 353 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 FAM122BQ7Z309 247 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 LRRC17Q8N6Y2 441 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 PTPMT1Q8WUK0 201 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-205ENST00000553474 C15orf40Q8WUR7 153 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 LCORQ96JN0 433 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-205ENST00000553474 LAT2Q9GZY6 243 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 DPAGT1Q9H3H5 408 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 MMP25Q9NPA2 562 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 LANCL2Q9NS86 450 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF281Q9Y2X9 895 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 NUBP2Q9Y5Y2 271 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 CLCA3PQ9Y6N3 262 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 SDK1Q7Z5N4 2213 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 LRRN3E7EW58 273 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 UQCRC1P31930 480 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 NAA10P41227 235 aaPredicted RBP11.77□□□□□ -0.52
SHMT2-205ENST00000553474 CENPAP49450 140 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 GZMKP49863 264 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 SCAND1P57086 179 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 CD83Q01151 205 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 FAPQ12884 760 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ERV3-1Q14264 604 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ELAVL1Q15717 326 aaKnown RBP11.77□□□□□ -0.52
SHMT2-205ENST00000553474 SLC25A35Q3KQZ1 300 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ALG10Q5BKT4 473 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF684Q5T5D7 378 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 LINC01590Q5TEZ4 76 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 FAM220AQ7Z4H9 259 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 MAML2Q8IZL2 1156 aaPredicted RBP11.77□□□□□ -0.52
SHMT2-205ENST00000553474 TOMM5Q8N4H5 51 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 DEFB119Q8N690 84 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 LMX1AQ8TE12 382 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ABHD1Q96SE0 405 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ALG12Q9BV10 488 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 ACTR6Q9GZN1 396 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 IRF2BPLQ9H1B7 796 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 LRRN3Q9H3W5 708 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 FKRPQ9H9S5 495 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 CUTCQ9NTM9 273 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 PAQR5Q9NXK6 330 aaPredicted RBP11.77□□□□□ -0.52
SHMT2-205ENST00000553474 TMEM14AQ9Y6G1 99 aa11.77□□□□□ -0.52
SHMT2-205ENST00000553474 GON4LQ3T8J9 2241 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 IGKV3D-11A0A0A0MRZ8 115 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 C7orf66A4D0T2 115 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 AIPO00170 330 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 PHYHO14832 338 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 TO15178 435 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ARHGEF9O43307 516 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF432O94892 652 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 UTS2O95399 124 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 IGKV3-11P04433 115 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ATF1P18846 271 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 SRMP19623 302 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ERVK-25P63136 954 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
SHMT2-205ENST00000553474 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 SRSF5Q13243 272 aaKnown RBP11.77□□□□□ -0.53
SHMT2-205ENST00000553474 EFR3AQ14156 821 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ANGPT1Q15389 498 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 NNATQ16517 81 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 NTRK2Q16620 822 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 C14orf28Q4W4Y0 310 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 LEG1Q6P5S2 330 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 TMEM151BQ8IW70 566 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 GPR135Q8IZ08 494 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 YIPF7Q8N8F6 280 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 EXD3Q8N9H8 876 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 LRRC75AQ8NAA5 344 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 OR6K6Q8NGW6 343 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 OR2T4Q8NH00 348 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 PHOSPHO1Q8TCT1 267 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 DMRTB1Q96MA1 342 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 TMEM246Q9BRR3 403 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ADAM19Q9H013 955 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 MARCH7Q9H992 704 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 ACOXLQ9NUZ1 547 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 PTTG3PQ9NZH4 202 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 EMC3Q9P0I2 261 aa11.77□□□□□ -0.53
SHMT2-205ENST00000553474 TP53BP1Q12888 1972 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-205ENST00000553474 KNL1Q8NG31 2342 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms