RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 RNPS1Q15287 305 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 OR2A2Q6IF42 318 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 H1FNTQ75WM6 255 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 MAMDC2Q7Z304 686 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 EPHX4Q8IUS5 362 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 WDFY1Q8IWB7 410 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 KDM8Q8N371 416 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 RELL2Q8NC24 303 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 OR9K2Q8NGE7 335 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 OR5J2Q8NH18 312 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 PIGXQ8TBF5 258 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 RND1Q92730 232 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 STARD4Q96DR4 205 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 SF3B5Q9BWJ5 86 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 NANSQ9NR45 359 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 JKAMPQ9P055 326 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 CLEC4AQ9UMR7 237 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 FLVCR1Q9Y5Y0 555 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 FREM1Q5H8C1 2179 aa13.2□□□□□ -0.3
MTHFD1-204ENST00000553405 HSPB2A8KAH6 182 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 TRAF3IP2O43734 574 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 PTP4A3O75365 173 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 VAMP5O95183 116 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 IL2RAP01589 272 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 TMIGD3P0DMS9 266 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 CTSSP25774 331 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 GPR4P46093 362 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 GSSP48637 474 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 HSPB2Q16082 182 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 C1orf94Q6P1W5 598 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 MTFR2Q6P444 385 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 VWA1Q6PCB0 445 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 FAM214BQ7L5A3 538 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 P4HA3Q7Z4N8 544 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 TUSC5Q8IXB3 177 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 LRRC75AQ8NAA5 344 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 OR9Q2Q8NGE9 314 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 LRTOMTQ8WZ04 291 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 SFXN3Q9BWM7 321 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 YY1AP1Q9H869 796 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 REEP1Q9H902 201 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 GLRX2Q9NS18 164 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 KLHL9Q9P2J3 617 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF629Q9UEG4 869 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 HIF3AQ9Y2N7 669 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 U3KQV3 271 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 CACNA1CQ13936 2221 aa13.19□□□□□ -0.3
MTHFD1-204ENST00000553405 ARRDC5A6NEK1 342 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 HNRNPRO43390 633 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF432O94892 652 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 YES1P07947 543 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 HLA-DOBP13765 273 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 AGAP20933 346 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 FPR3P25089 353 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 DNAJA1P31689 397 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 RPL18Q07020 188 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 MICAQ29983 383 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 ZFP1Q6P2D0 407 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 CREB3L2Q70SY1 520 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 NUFIP2Q7Z417 695 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 BTLAQ7Z6A9 289 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 OR13C2Q8NGS9 318 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 MOSPD2Q8NHP6 518 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 OXGR1Q96P68 337 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF385AQ96PM9 386 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 PRRG4Q9BZD6 226 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 S100A14Q9HCY8 104 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 TMEM5Q9Y2B1 443 aa13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 MAGED1Q9Y5V3 778 aaPredicted RBP13.18□□□□□ -0.3
MTHFD1-204ENST00000553405 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 EFCAB9A8MZ26 197 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 CHRNB4P30926 498 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 AQP2P41181 271 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 SLC9A3P48764 834 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 TFF3Q07654 80 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 PUDPQ08623 228 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 PMS2P3Q13401 168 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 SHQ1Q6PI26 577 aaKnown RBP13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 PXKQ7Z7A4 578 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 C10orf53Q8N6V4 93 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 OR6K3Q8NGY3 331 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 LILRB4Q8NHJ6 448 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 TMEM45BQ96B21 275 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF775Q96BV0 537 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 TNFRSF13CQ96RJ3 184 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 PKP2Q99959 881 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms