RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 HSPA12BQ96MM6 686 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 MS4A4EQ96PG1 132 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 REG4Q9BYZ8 158 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 PRDM9Q9NQV7 894 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 KIF25Q9UIL4 384 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 CD207Q9UJ71 328 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-230ENST00000552960 PCDHGA9Q9Y5G4 932 aaKnown RBP11.34□□□□□ -0.59
HDAC7-230ENST00000552960 PLSCR5A0PG75 271 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 UBE2QL1A1L167 161 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 MFSD2BA6NFX1 497 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 PYCARD-AS1I3L0S3 204 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 SUSD5O60279 629 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 RNGTTO60942 597 aaKnown RBP11.34□□□□□ -0.59
HDAC7-230ENST00000552960 SC5DO75845 299 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 TGM6O95932 706 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 TMIGD3P0DMS9 266 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-230ENST00000552960 CDK2P24941 298 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 IGFALSP35858 605 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 SEC61A1P61619 476 aaKnown RBP11.34□□□□□ -0.59
HDAC7-230ENST00000552960 EIPR1Q53HC9 387 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 ZNF776Q68DI1 518 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-230ENST00000552960 TMUB2Q71RG4 321 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 CCL4L1Q8NHW4 92 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 SARGQ9BW04 601 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 IL21RQ9HBE5 538 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 TMEM27Q9HBJ8 222 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 INPP5EQ9NRR6 644 aa11.34□□□□□ -0.59
HDAC7-230ENST00000552960 ZNF879B4DU55 563 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 PRAF2O60831 178 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 MTRF1O75570 445 aaKnown RBP11.33□□□□□ -0.59
HDAC7-230ENST00000552960 EML2O95834 649 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 MAS1P04201 325 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 ZNF273Q14593 569 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 C2orf68Q2NKX9 166 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 PRAMEF8Q5VWM4 474 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 PRAMEF7Q5VXH5 474 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 ELP2Q6IA86 826 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 ZNF765Q7L2R6 523 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 SDR16C5Q8N3Y7 309 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 OR52H1Q8NGJ2 320 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 ZNF681Q96N22 645 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 SLC17A9Q9BYT1 436 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 GPR160Q9UJ42 338 aa11.33□□□□□ -0.59
HDAC7-230ENST00000552960 TRAV1-2A0A0B4J238 106 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 A0A1B0GUH1 482 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 IFITM5A6NNB3 132 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 H0YC42 278 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 GABARAPH6UMI1 98 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 ECDO95905 644 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 IGF2P01344 180 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 ERGP11308 486 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 IFNGR1P15260 489 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 RAP2BP61225 183 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 ACTC1P68032 377 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 ACTA1P68133 377 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 PCGF3Q3KNV8 242 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 RGS7BPQ6MZT1 257 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 SFTPA2Q8IWL1 248 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 SLC35F2Q8IXU6 374 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 OR6V1Q8N148 313 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 OR4K14Q8NGD5 310 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 DNAJA3Q96EY1 480 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 MRGPRX1Q96LB2 322 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 NMNAT3Q96T66 252 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 CNN2Q99439 309 aaKnown RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 MED11Q9P086 117 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 ZNF223Q9UK11 482 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 SLCO1B1Q9Y6L6 691 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 RASGRP1O95267 797 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 FBXO45P0C2W1 286 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 GABRA3P34903 492 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 PON3Q15166 354 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 C4orf46Q504U0 113 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 DCST2Q5T1A1 773 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 MRM1Q6IN84 353 aaKnown RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 FAM199XQ6PEV8 388 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 ADAMTSL4Q6UY14 1074 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 TMPRSS12Q86WS5 348 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 PDZD9Q8IXQ8 264 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 OR2L3Q8NG85 312 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 RAB7BQ96AH8 199 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 TCF7L1Q9HCS4 588 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-230ENST00000552960 PCDHB16Q9NRJ7 776 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 NPTNQ9Y639 398 aa11.33□□□□□ -0.6
HDAC7-230ENST00000552960 BET1O15155 118 aa11.32□□□□□ -0.6
HDAC7-230ENST00000552960 PIN1P1O15428 100 aa11.32□□□□□ -0.6
HDAC7-230ENST00000552960 ADH1BP00325 375 aa11.32□□□□□ -0.6
HDAC7-230ENST00000552960 CEACAM5P06731 702 aa11.32□□□□□ -0.6
HDAC7-230ENST00000552960 GIPP09681 153 aaPredicted RBP11.32□□□□□ -0.6
HDAC7-230ENST00000552960 P2RX1P51575 399 aa11.32□□□□□ -0.6
HDAC7-230ENST00000552960 RPS11P62280 158 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC7-230ENST00000552960 EEF1A1P68104 462 aaKnown RBP11.32□□□□□ -0.6
HDAC7-230ENST00000552960 SORDQ00796 357 aa11.32□□□□□ -0.6
HDAC7-230ENST00000552960 CBFBQ13951 182 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms