RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 COPS7AQ9UBW8 275 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 PRODH2Q9UF12 536 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SLC22A13Q9Y226 551 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 MRPS17Q9Y2R5 130 aaKnown RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 KLHDC2Q9Y2U9 406 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 NUP210Q8TEM1 1887 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ACACAQ13085 2346 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LOC100509620A0A075B734 347 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 A0A1W2PNR3 127 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LMO7DNF2Z398 122 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 PLA2G10O15496 165 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 DUX1O43812 170 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LYPD3O95274 346 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 IL1AP01583 271 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 HEXBP07686 556 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 HLA-DOBP13765 273 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SPI1P17947 270 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 PRSS12P56730 875 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 HSD11B2P80365 405 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 DGCR2P98153 550 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF117Q03924 483 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 RPL18Q07020 188 aaKnown RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CEBPEQ15744 281 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZFP69Q49AA0 526 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 BCL2L15Q5TBC7 163 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 VASNQ6EMK4 673 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 OR7E24Q6IFN5 339 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 CD300LDQ6UXZ3 194 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 FCRLAQ7L513 359 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 VASH1Q7L8A9 365 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SLC29A4Q7RTT9 530 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 IL17RDQ8NFM7 739 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ASB12Q8WXK4 309 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 AP3S1Q92572 193 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 PELI1Q96FA3 418 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 AMELYQ99218 206 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 LPAR4Q99677 370 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 G6PC3Q9BUM1 346 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ERVMER34-1Q9H9K5 563 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 UBQLN4Q9NRR5 601 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 NCDNQ9UBB6 729 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF221Q9UK13 617 aa5.1□□□□□ -1.59
LIMA1-215ENST00000552823 TRDV1A0A1B0GX56 115 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 A0A1W2PR77 199 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 CENPXA8MT69 81 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 H0YC42 278 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 XKRYO14609 159 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 PTP4A3O75365 173 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 MT-ND4P03905 459 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 HOXC4P09017 264 aaPredicted RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 SLC2A1P11166 492 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 GP1BBP13224 206 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 RAB3BP20337 219 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 MAP2K3P46734 347 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 FMODQ06828 376 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 LGALS3BPQ08380 585 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 OR7A5Q15622 319 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 CEP78Q5JTW2 689 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 OR10K2Q6IF99 312 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 SFXN4Q6P4A7 337 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 MZT2AQ6P582 158 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 LRFN4Q6PJG9 635 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 COMMD2Q86X83 199 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 OR51A4Q8NGJ6 313 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 OR8S1Q8NH09 359 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 BRIX1Q8TDN6 353 aaKnown RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 TSEN15Q8WW01 171 aaKnown RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 TMCO6Q96DC7 493 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 LCORQ96JN0 433 aaPredicted RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 ARL5BQ96KC2 179 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF578Q96N58 590 aaPredicted RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 ABHD1Q96SE0 405 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 AUNIPQ9H7T9 357 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 TRPV5Q9NQA5 729 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 KCNG2Q9UJ96 466 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 LAMP5Q9UJQ1 280 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 TMEM5Q9Y2B1 443 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 SIT1Q9Y3P8 196 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 CLDN16Q9Y5I7 305 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 LYRM1O43325 122 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 KLF4O43474 513 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 GSTT2P0CG29 244 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 GSTT2BP0CG30 244 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 ATF1P18846 271 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 GPR143P51810 404 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 PRKXP51817 358 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 NXPH1P58417 271 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 NANOS3P60323 173 aaKnown RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 SIRPAP78324 504 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 CCL7P80098 99 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 EFNB1P98172 346 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 SMAD4Q13485 552 aaKnown RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 KRR1Q13601 381 aaKnown RBP5.09□□□□□ -1.59
LIMA1-215ENST00000552823 GALEQ14376 348 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 FGFBP1Q14512 234 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 HSD17B12Q53GQ0 312 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 ATAD3CQ5T2N8 411 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 AGAP6Q5VW22 663 aa5.09□□□□□ -1.59
LIMA1-215ENST00000552823 PRAMEF8Q5VWM4 474 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms