RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 ZNF347Q96SE7 839 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 TACO1Q9BSH4 297 aaKnown RBP8.11□□□□□ -1.11
CCDC59-207ENST00000552606 FNDC11Q9BVV2 318 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 TAPBPLQ9BX59 468 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 PRRG4Q9BZD6 226 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 UCK2Q9BZX2 261 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 PIGMQ9H3S5 423 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 FKRPQ9H9S5 495 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 NMNAT1Q9HAN9 279 aaPredicted RBP8.11□□□□□ -1.11
CCDC59-207ENST00000552606 CHST11Q9NPF2 352 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 FANCFQ9NPI8 374 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 CORINQ9Y5Q5 1042 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 FLVCR1Q9Y5Y0 555 aa8.11□□□□□ -1.11
CCDC59-207ENST00000552606 A1L4Q6 167 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 HTR3EA5X5Y0 456 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 C19orf84I3L1E1 186 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 TRAF3IP2O43734 574 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 HPRP00739 348 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 PLGP00747 810 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 H1F0P07305 194 aaKnown RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 YES1P07947 543 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 CBLP22681 906 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 NTF4P34130 210 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 CTBP2P56545 445 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 RPS4XP62701 263 aaKnown RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 CHRNB3Q05901 458 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 FHL1Q13642 323 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 MFSD13AQ14CX5 517 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 SEC23BQ15437 767 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 EEF1A1P5Q5VTE0 462 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 NHLRC1Q6VVB1 395 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 NUFIP2Q7Z417 695 aaKnown RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 MCEMP1Q8IX19 187 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 CNEP1R1Q8N9A8 125 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 ZIC4Q8N9L1 334 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 OR9K2Q8NGE7 335 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 CANT1Q8WVQ1 401 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 ACOT11Q8WXI4 607 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 TMEM45BQ96B21 275 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 SLC25A36Q96CQ1 311 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 RSRC1Q96IZ7 334 aaKnown RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 HS6ST2Q96MM7 605 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 SEPHS2Q99611 448 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 NAA11Q9BSU3 229 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 SF3B5Q9BWJ5 86 aaKnown RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 OPN3Q9H1Y3 402 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 ARMC1Q9NVT9 282 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 VNN3Q9NY84 501 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 MRPL39Q9NYK5 338 aaKnown RBP8.1□□□□□ -1.11
CCDC59-207ENST00000552606 EMC3Q9P0I2 261 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 ZNF229Q9UJW7 825 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 B3GALT5Q9Y2C3 310 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 MED31Q9Y3C7 131 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 TESMINQ9Y4I5 508 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 PRR14LQ5THK1 2151 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 ALPK2Q86TB3 2170 aa8.1□□□□□ -1.11
CCDC59-207ENST00000552606 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 LOC102725191A0A1B0GVB3 256 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 SH3PXD2BA1X283 911 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 ERICH4A6NGS2 130 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 A8MXE2 369 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 EEF1E1-BLOC1S5C9J1V9 151 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 MS4A18H0YCH9 400 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 MSTNO14793 375 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 EEF1E1O43324 174 aaKnown RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 FKBP6O75344 327 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 OR7A10O76100 309 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 VAMP5O95183 116 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 CH25HO95992 272 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 MAKP20794 623 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 GTF2E2P29084 291 aaKnown RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 RRM2P31350 389 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 UQCRC1P31930 480 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 OR3A2P47893 321 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 PCYT1AP49585 367 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 SMIM11AP58511 58 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 SPIBQ01892 262 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 PRKCDQ05655 676 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 PUDPQ08623 228 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 CCNIQ14094 377 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 MS4A18Q3C1V0 323 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 TMEM201Q5SNT2 666 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 GTF2IRD2BQ6EKJ0 949 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 PODNL1Q6PEZ8 512 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 ZNF474Q6S9Z5 364 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 TBPL2Q6SJ96 375 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 MBOAT2Q6ZWT7 520 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 H1FNTQ75WM6 255 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 ZNF771Q7L3S4 317 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 MAMDC2Q7Z304 686 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 GTF2IRD2Q86UP8 949 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 SPATA24Q86W54 205 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 EPHX4Q8IUS5 362 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 NRMQ8IXM6 262 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 RNF113BQ8IZP6 322 aaKnown RBP8.09□□□□□ -1.11
CCDC59-207ENST00000552606 LRRC17Q8N6Y2 441 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 OR4C15Q8NGM1 316 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 OR5J2Q8NH18 312 aa8.09□□□□□ -1.11
CCDC59-207ENST00000552606 SLCO4A1Q96BD0 722 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms