RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 GNA13Q14344 377 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 MAPK11Q15759 364 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 NTRK2Q16620 822 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 DECR1Q16698 335 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF791Q3KP31 576 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 DNAL1Q4LDG9 190 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF766Q5HY98 468 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 DCST2Q5T1A1 773 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 GCNT6Q5T4J0 391 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 PRAMEF8Q5VWM4 474 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 PRAMEF7Q5VXH5 474 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TMEM211Q6ICI0 200 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TNFAIP8L2Q6P589 184 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 ERICH5Q6P6B1 374 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TMEM81Q6P7N7 255 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 OPN5Q6U736 354 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 C12orf54Q6X4T0 127 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 LRRC74BQ6ZQY2 392 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 CCDC121Q6ZUS5 278 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 C16orf62Q7Z3J2 963 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 PTOV1Q86YD1 416 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC30A8Q8IWU4 369 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 DEFB107AQ8IZN7 70 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 BEST3Q8N1M1 668 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 COX18Q8N8Q8 333 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 OR4N2Q8NGD1 307 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 FBXO30Q8TB52 745 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC38A5Q8WUX1 472 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 XAGE5Q8WWM1 108 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 OIT3Q8WWZ8 545 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 PIK3R3Q92569 461 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 PMM1Q92871 262 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 RAB8BQ92930 207 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TMBIM1Q969X1 311 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SPACA9Q96E40 222 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 OMA1Q96E52 524 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 REXO5Q96IC2 774 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF583Q96ND8 569 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 TRNT1Q96Q11 434 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 SDF2Q99470 211 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 BTBD10Q9BSF8 475 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF350Q9GZX5 532 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 LIN28AQ9H9Z2 209 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 BCL2L10Q9HD36 194 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 CMTM6Q9NX76 183 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 CALML5Q9NZT1 146 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 P2RX2Q9UBL9 471 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 CD300AQ9UGN4 299 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 PRPF19Q9UMS4 504 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 OR10H1Q9Y4A9 318 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 KCNE3Q9Y6H6 103 aa5.78□□□□□ -1.48
DEPDC4-210ENST00000551642 DSPPQ9NZW4 1301 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 A0A0G2JPF8 293 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 A0A1B0GTH9 108 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 GXYLT2A0PJZ3 443 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 TMEM247A6NEH6 219 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 PRORSD1PA6NEY8 169 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 A8MV72 311 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 HNRNPCL2B2RXH8 293 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 HNRNPCL3B7ZW38 293 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 NPIPB9F8W1W9 429 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 OR6B1O95007 311 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 IGKV1D-16P01601 117 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 NGFRP08138 427 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 HNRNPCL4P0DMR1 293 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 NR2F1P10589 423 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 TBXA2RP21731 343 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 IL12BP29460 328 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 PCGF2P35227 344 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 KRT20P35900 424 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 SOX3P41225 446 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 CYB561P49447 251 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 GSK3BP49841 420 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 CRISP3P54108 245 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 CDK6Q00534 326 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 LIPEQ05469 1076 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 PLCXD2Q0VAA5 305 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 EFR3AQ14156 821 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 NNATQ16517 81 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 SYPL1Q16563 259 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 CYP51A1Q16850 503 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 GPAT3Q53EU6 434 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 SAMD4BQ5PRF9 694 aaKnown RBP5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 TYW3Q6IPR3 259 aaKnown RBP5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 REEP3Q6NUK4 255 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 CCDC80Q76M96 950 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 ASRGL1Q7L266 308 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 NUP54Q7Z3B4 507 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 PRR22Q8IZ63 422 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 EID3Q8N140 333 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 TMEM156Q8N614 296 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 C11orf65Q8NCR3 313 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 TNIP2Q8NFZ5 429 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 OR2T12Q8NG77 320 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 OR10A6Q8NH74 314 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 RNF138Q8WVD3 245 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 NTNG2Q96CW9 530 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 OTUB1Q96FW1 271 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 SGCZQ96LD1 299 aa5.77□□□□□ -1.49
DEPDC4-210ENST00000551642 COL21A1Q96P44 957 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms