RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ZNF23P17027 643 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 ROR2Q01974 943 aaKnown RBP20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 ADIPOQQ15848 244 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 UGT2A3Q6UWM9 527 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 EPHX4Q8IUS5 362 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 CCDC36Q8IYA8 594 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 ANKS4BQ8N8V4 417 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 NUP37Q8NFH4 326 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 SLC38A5Q8WUX1 472 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 ITCHQ96J02 903 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 PRR14Q9BWN1 585 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 RAD21L1Q9H4I0 556 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 THAP1Q9NVV9 213 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 RCE1Q9Y256 329 aa20.07■□□□□ 0.8
SMARCD1-209ENST00000550477 HAX1O00165 279 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 CECR9P0C854 216 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 ETFAP13804 333 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 EPHA3P29320 983 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 P2RY4P51582 365 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 C1DQ13901 141 aaKnown RBP20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 KRTAP24-1Q3LI83 254 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 PDCD4Q53EL6 469 aaKnown RBP20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 ZNF311Q5JNZ3 666 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 ATG16L1Q676U5 607 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 C5orf46Q6UWT4 87 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 GPR137CQ8N3F9 429 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 SLC35B4Q969S0 331 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 OXGR1Q96P68 337 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 ZNF442Q9H7R0 627 aa20.06■□□□□ 0.8
SMARCD1-209ENST00000550477 NR5A2O00482 541 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 NPIPB7O75200 414 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 UPK3AO75631 287 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 CBR1P16152 277 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 NPR2P20594 1047 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 ARR3P36575 388 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 CLDN17P56750 224 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 CEP85LQ5SZL2 805 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 MSANTD1Q6ZTZ1 278 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 CLIP4Q8N3C7 705 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 TMEM19Q96HH6 336 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 C19orf24Q9BVV8 132 aa20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 WDR55Q9H6Y2 383 aaPredicted RBP20.05■□□□□ 0.8
SMARCD1-209ENST00000550477 IGHV4-61A0A0C4DH41 118 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 RPL36A-HNRNPH2H7BZ11 118 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 IGKV3-15P01624 115 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 IGLV1-44P01699 117 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 KITP10721 976 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 PNMTP11086 282 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 RPS5P46782 204 aaKnown RBP20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 CHN2P52757 468 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 IL1RL1Q01638 556 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 C6orf10Q5SRN2 563 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 NET1Q7Z628 596 aaPredicted RBP20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 BPESC1Q9GZL8 116 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 DYNLRB1Q9NP97 96 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 ZIM2Q9NZV7 527 aa20.04■□□□□ 0.8
SMARCD1-209ENST00000550477 SLC35F4A4IF30 521 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 C5orf58C9J3I9 102 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 hCG_2039718K7EN88 272 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 AIM2O14862 343 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 STAMBPO95630 424 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 DAOP14920 347 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 CAPZA2P47755 286 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 MVDP53602 400 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 TUBA1BP68363 451 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 TUBA4AP68366 448 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 ARF1P84077 181 aaKnown RBP20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 LGALS3BPQ08380 585 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 MAPK11Q15759 364 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 IL17RELQ6ZVW7 336 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 TUBA1AQ71U36 451 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 SPATA21Q7Z572 469 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 SERPINA11Q86U17 422 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 ANKRD42Q8N9B4 389 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 PIK3C3Q8NEB9 887 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 HPS1Q92902 700 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 C12orf10Q9HB07 376 aa20.03■□□□□ 0.8
SMARCD1-209ENST00000550477 TMEM229AB2RXF0 380 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 PRG2P13727 222 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 PCMT1P22061 227 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 CALCRP30988 508 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 MFSD13AQ14CX5 517 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 FAM69AQ5T7M9 428 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 KDM8Q8N371 416 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 SLC38A4Q969I6 547 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 SELENONQ9NZV5 590 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 USP22Q9UPT9 525 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 SPEF1Q9Y4P9 236 aa20.02■□□□□ 0.8
SMARCD1-209ENST00000550477 CUBNO60494 3623 aa20.02■□□□□ 0.79
SMARCD1-209ENST00000550477 FTCDNL1E5RQL4 147 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 GIFP27352 417 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 POLR2JP52435 117 aaKnown RBP20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 NPRL3Q12980 569 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 FADDQ13158 208 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 MPP2Q14168 576 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 CR1LQ2VPA4 569 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 RPS26P11Q5JNZ5 115 aaPredicted RBP20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 LINGO2Q7L985 606 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 SNX32Q86XE0 403 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 BBS10Q8TAM1 723 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms